Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC8.32□□□□□ -1.08
VARSP26640 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC8.32□□□□□ -1.08
VARSP26640 CFL1P7-201ENST00000424759 486 ntBASIC8.32□□□□□ -1.08
VARSP26640 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC8.32□□□□□ -1.08
VARSP26640 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC8.32□□□□□ -1.08
VARSP26640 FAR2P1-206ENST00000449736 709 ntBASIC8.32□□□□□ -1.08
VARSP26640 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC8.32□□□□□ -1.08
VARSP26640 AL391825.1-202ENST00000458136 741 ntBASIC8.32□□□□□ -1.08
VARSP26640 AC110994.1-201ENST00000468519 406 ntBASIC8.32□□□□□ -1.08
VARSP26640 RPL34P29-201ENST00000491411 325 ntBASIC8.32□□□□□ -1.08
VARSP26640 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 AC017007.1-201ENST00000511960 415 ntBASIC8.32□□□□□ -1.08
VARSP26640 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC8.32□□□□□ -1.08
VARSP26640 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC8.32□□□□□ -1.08
VARSP26640 IGKV3-34-201ENST00000521692 293 ntBASIC8.32□□□□□ -1.08
VARSP26640 AP002469.1-201ENST00000526011 1043 ntBASIC8.32□□□□□ -1.08
VARSP26640 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC8.32□□□□□ -1.08
VARSP26640 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC8.32□□□□□ -1.08
VARSP26640 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
VARSP26640 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.32□□□□□ -1.08
VARSP26640 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC8.32□□□□□ -1.08
VARSP26640 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 AC013565.2-201ENST00000564874 310 ntBASIC8.32□□□□□ -1.08
VARSP26640 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC8.32□□□□□ -1.08
VARSP26640 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 AC103881.1-201ENST00000603476 538 ntBASIC8.32□□□□□ -1.08
VARSP26640 AC012557.1-201ENST00000607115 611 ntBASIC8.32□□□□□ -1.08
VARSP26640 AC243772.3-202ENST00000609662 1148 ntBASIC8.32□□□□□ -1.08
VARSP26640 AC106028.5-201ENST00000610332 395 ntBASIC8.32□□□□□ -1.08
VARSP26640 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 AL121785.1-201ENST00000624745 708 ntBASIC8.32□□□□□ -1.08
VARSP26640 PATE2-201ENST00000358524 1657 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 PSG10P-201ENST00000501199 1500 ntBASIC8.32□□□□□ -1.08
VARSP26640 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC8.32□□□□□ -1.08
VARSP26640 SMARCA2-202ENST00000324954 1781 ntTSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC8.32□□□□□ -1.08
VARSP26640 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 AC073349.2-201ENST00000427545 1603 ntBASIC8.32□□□□□ -1.08
VARSP26640 KLRC1-207ENST00000544822 1600 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARSP26640 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
VARSP26640 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
VARSP26640 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.32□□□□□ -1.08
VARSP26640 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 TRIM60P14-201ENST00000513444 1419 ntBASIC8.31□□□□□ -1.08
VARSP26640 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
VARSP26640 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 AP003972.1-201ENST00000625192 5446 ntBASIC8.31□□□□□ -1.08
VARSP26640 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 RNU6-1331P-201ENST00000363658 106 ntBASIC8.31□□□□□ -1.08
VARSP26640 Y_RNA.209-201ENST00000364156 111 ntBASIC8.31□□□□□ -1.08
VARSP26640 Y_RNA.356-201ENST00000365475 113 ntBASIC8.31□□□□□ -1.08
VARSP26640 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 MIR185-201ENST00000385288 82 ntBASIC8.31□□□□□ -1.08
VARSP26640 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
VARSP26640 AC084880.1-201ENST00000392530 545 ntBASIC8.31□□□□□ -1.08
VARSP26640 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC8.31□□□□□ -1.08
VARSP26640 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC8.31□□□□□ -1.08
VARSP26640 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC8.31□□□□□ -1.08
VARSP26640 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC8.31□□□□□ -1.08
VARSP26640 AC096632.2-201ENST00000438139 1239 ntBASIC8.31□□□□□ -1.08
VARSP26640 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC8.31□□□□□ -1.08
VARSP26640 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VARSP26640 DDX39BP2-208ENST00000453923 258 ntBASIC8.31□□□□□ -1.08
VARSP26640 SNX18P4-201ENST00000456554 838 ntBASIC8.31□□□□□ -1.08
VARSP26640 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 AC013267.1-201ENST00000458227 267 ntBASIC8.31□□□□□ -1.08
VARSP26640 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC8.31□□□□□ -1.08
VARSP26640 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC8.31□□□□□ -1.08
VARSP26640 VPS26AP1-201ENST00000483197 979 ntBASIC8.31□□□□□ -1.08
VARSP26640 GGTA1P-204ENST00000488429 1104 ntBASIC8.31□□□□□ -1.08
VARSP26640 RNF138P1-201ENST00000502765 546 ntBASIC8.31□□□□□ -1.08
VARSP26640 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC8.31□□□□□ -1.08
VARSP26640 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC8.31□□□□□ -1.08
VARSP26640 CFL1P5-201ENST00000508046 502 ntBASIC8.31□□□□□ -1.08
VARSP26640 AC114786.3-201ENST00000509304 705 ntBASIC8.31□□□□□ -1.08
VARSP26640 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC8.31□□□□□ -1.08
VARSP26640 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms