RNA–Protein interactions for RNA: ENST00000375540.5

ECM2-202, Transcript of extracellular matrix protein 2, humanhuman

TSL 2 BASIC

Gene ECM2, Length 1,606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-202ENST00000375540 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
ECM2-202ENST00000375540 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
ECM2-202ENST00000375540 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
ECM2-202ENST00000375540 SENP3Q9H4L4 574 aaPredicted RBP18.56■□□□□ 0.56
ECM2-202ENST00000375540 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
ECM2-202ENST00000375540 FOXD1Q16676 465 aa17.18■□□□□ 0.34
ECM2-202ENST00000375540 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
ECM2-202ENST00000375540 PPP6R1Q9UPN7 881 aa16.46■□□□□ 0.23
ECM2-202ENST00000375540 ADRA2BP18089 450 aa16.45■□□□□ 0.22
ECM2-202ENST00000375540 PIAS4Q8N2W9 510 aaPredicted RBP16.21■□□□□ 0.19
ECM2-202ENST00000375540 MSH5O43196 834 aa15.97■□□□□ 0.15
ECM2-202ENST00000375540 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
ECM2-202ENST00000375540 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
ECM2-202ENST00000375540 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
ECM2-202ENST00000375540 DMRT2Q9Y5R5 561 aa14.79□□□□□ -0.04
ECM2-202ENST00000375540 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.05
ECM2-202ENST00000375540 CNKSR2Q8WXI2 1034 aa14.76□□□□□ -0.05
ECM2-202ENST00000375540 KCNA4P22459 653 aa14.7□□□□□ -0.06
ECM2-202ENST00000375540 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
ECM2-202ENST00000375540 RNF216Q9NWF9 866 aaPredicted RBP14.49□□□□□ -0.09
ECM2-202ENST00000375540 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
ECM2-202ENST00000375540 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
ECM2-202ENST00000375540 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
ECM2-202ENST00000375540 CACNB1Q02641 598 aaPredicted RBP14.02□□□□□ -0.16
ECM2-202ENST00000375540 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
ECM2-202ENST00000375540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.21
ECM2-202ENST00000375540 SLC4A2P04920 1241 aa13.71□□□□□ -0.22
ECM2-202ENST00000375540 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
ECM2-202ENST00000375540 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
ECM2-202ENST00000375540 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
ECM2-202ENST00000375540 ZBTB22O15209 634 aa13.51□□□□□ -0.25
ECM2-202ENST00000375540 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
ECM2-202ENST00000375540 C1QBPQ07021 282 aaKnown RBP13.48□□□□□ -0.25
ECM2-202ENST00000375540 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
ECM2-202ENST00000375540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
ECM2-202ENST00000375540 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
ECM2-202ENST00000375540 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
ECM2-202ENST00000375540 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
ECM2-202ENST00000375540 APLP2Q06481 763 aa13.27□□□□□ -0.29
ECM2-202ENST00000375540 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
ECM2-202ENST00000375540 ATXN8OSP0DMR3 200 aa13.13□□□□□ -0.31
ECM2-202ENST00000375540 CAPN15O75808 1086 aa13.13□□□□□ -0.31
ECM2-202ENST00000375540 ZNF219Q9P2Y4 722 aaPredicted RBP13.08□□□□□ -0.32
ECM2-202ENST00000375540 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
ECM2-202ENST00000375540 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
ECM2-202ENST00000375540 DSG3P32926 999 aa12.92□□□□□ -0.34
ECM2-202ENST00000375540 POTEHQ6S545 545 aa12.85□□□□□ -0.35
ECM2-202ENST00000375540 ABCB7O75027 752 aa12.84□□□□□ -0.35
ECM2-202ENST00000375540 POLA2Q14181 598 aa12.82□□□□□ -0.36
ECM2-202ENST00000375540 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
ECM2-202ENST00000375540 FBLN2P98095 1184 aa12.55□□□□□ -0.4
ECM2-202ENST00000375540 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
ECM2-202ENST00000375540 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
ECM2-202ENST00000375540 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
ECM2-202ENST00000375540 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
ECM2-202ENST00000375540 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
ECM2-202ENST00000375540 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
ECM2-202ENST00000375540 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
ECM2-202ENST00000375540 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
ECM2-202ENST00000375540 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
ECM2-202ENST00000375540 SSUH2Q9Y2M2 353 aa12.17□□□□□ -0.46
ECM2-202ENST00000375540 FKBP8Q14318 412 aa12.11□□□□□ -0.47
ECM2-202ENST00000375540 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
ECM2-202ENST00000375540 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
ECM2-202ENST00000375540 PROM2Q8N271 834 aa11.98□□□□□ -0.49
ECM2-202ENST00000375540 SPDYE1Q8NFV5 336 aaPredicted RBP11.94□□□□□ -0.5
ECM2-202ENST00000375540 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
ECM2-202ENST00000375540 PITPNM1O00562 1244 aa11.89□□□□□ -0.51
ECM2-202ENST00000375540 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
ECM2-202ENST00000375540 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
ECM2-202ENST00000375540 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
ECM2-202ENST00000375540 PRR29P0C7W0 189 aa11.75□□□□□ -0.53
ECM2-202ENST00000375540 FBXO3Q9UK99 471 aa11.75□□□□□ -0.53
ECM2-202ENST00000375540 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
ECM2-202ENST00000375540 PIP4P2Q8N4L2 257 aa11.67□□□□□ -0.54
ECM2-202ENST00000375540 PRKAR2AP13861 404 aaKnown RBP11.6□□□□□ -0.55
ECM2-202ENST00000375540 VASPP50552 380 aaPredicted RBP11.57□□□□□ -0.56
ECM2-202ENST00000375540 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
ECM2-202ENST00000375540 MIER1Q8N108 512 aa11.56□□□□□ -0.56
ECM2-202ENST00000375540 PLEKHG5O94827 1062 aa11.55□□□□□ -0.56
ECM2-202ENST00000375540 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
ECM2-202ENST00000375540 PLCD3Q8N3E9 789 aa11.54□□□□□ -0.56
ECM2-202ENST00000375540 FARP1Q9Y4F1 1045 aaPredicted RBP11.47□□□□□ -0.57
ECM2-202ENST00000375540 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
ECM2-202ENST00000375540 MNX1P50219 401 aaPredicted RBP11.45□□□□□ -0.58
ECM2-202ENST00000375540 HAX1O00165 279 aa11.42□□□□□ -0.58
ECM2-202ENST00000375540 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
ECM2-202ENST00000375540 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
ECM2-202ENST00000375540 KLHL34Q8N239 644 aa11.37□□□□□ -0.59
ECM2-202ENST00000375540 C19orf67A6NJJ6 358 aa11.29□□□□□ -0.6
ECM2-202ENST00000375540 SPOCK2Q92563 424 aa11.27□□□□□ -0.6
ECM2-202ENST00000375540 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
ECM2-202ENST00000375540 NUBP1P53384 320 aa11.27□□□□□ -0.61
ECM2-202ENST00000375540 EVX2Q03828 476 aa11.27□□□□□ -0.61
ECM2-202ENST00000375540 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
ECM2-202ENST00000375540 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
ECM2-202ENST00000375540 FAM212AQ96EL1 285 aa11.21□□□□□ -0.61
ECM2-202ENST00000375540 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
ECM2-202ENST00000375540 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
ECM2-202ENST00000375540 GSE1Q14687 1217 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 589.8 ms