RNA–Protein interactions for RNA: ENST00000521692.1

IGKV3-34-201, Transcript of immunoglobulin kappa variable 3-34 (pseudogene), humanhuman

BASIC

Gene IGKV3-34, Length 293 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-34-201ENST00000521692 NISCHQ9Y2I1 1504 aa17.55■□□□□ 0.4
IGKV3-34-201ENST00000521692 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.33
IGKV3-34-201ENST00000521692 CHIC1Q5VXU3 224 aa17.03■□□□□ 0.32
IGKV3-34-201ENST00000521692 ABCC9O60706 1549 aa15.16■□□□□ 0.02
IGKV3-34-201ENST00000521692 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
IGKV3-34-201ENST00000521692 PHF23Q9BUL5 403 aaPredicted RBP15.09■□□□□ 0.01
IGKV3-34-201ENST00000521692 ZCCHC6Q5VYS8 1495 aaKnown RBP14.86□□□□□ -0.03
IGKV3-34-201ENST00000521692 DCAF1Q9Y4B6 1507 aa14.74□□□□□ -0.05
IGKV3-34-201ENST00000521692 MYO15BQ96JP2 1530 aa14.42□□□□□ -0.1
IGKV3-34-201ENST00000521692 RB1CC1Q8TDY2 1594 aa14.39□□□□□ -0.11
IGKV3-34-201ENST00000521692 SENP3Q9H4L4 574 aaPredicted RBP14.37□□□□□ -0.11
IGKV3-34-201ENST00000521692 SHROOM4Q9ULL8 1493 aa14.32□□□□□ -0.12
IGKV3-34-201ENST00000521692 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
IGKV3-34-201ENST00000521692 NACADO15069 1562 aa14.22□□□□□ -0.13
IGKV3-34-201ENST00000521692 SUPT5HO00267 1087 aaKnown RBP14.18□□□□□ -0.14
IGKV3-34-201ENST00000521692 DCAF8L2P0C7V8 631 aa14.18□□□□□ -0.14
IGKV3-34-201ENST00000521692 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
IGKV3-34-201ENST00000521692 PABPN1Q86U42 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
IGKV3-34-201ENST00000521692 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
IGKV3-34-201ENST00000521692 BICRAQ9NZM4 1560 aa13.95□□□□□ -0.18
IGKV3-34-201ENST00000521692 RSF1Q96T23 1441 aaPredicted RBP13.79□□□□□ -0.2
IGKV3-34-201ENST00000521692 SCRIBQ14160 1630 aa13.74□□□□□ -0.21
IGKV3-34-201ENST00000521692 CC2D2AQ9P2K1 1620 aa13.71□□□□□ -0.22
IGKV3-34-201ENST00000521692 CECR2Q9BXF3 1484 aa13.64□□□□□ -0.23
IGKV3-34-201ENST00000521692 HRCP23327 699 aa13.64□□□□□ -0.23
IGKV3-34-201ENST00000521692 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
IGKV3-34-201ENST00000521692 BAZ1AQ9NRL2 1556 aaPredicted RBP13.56□□□□□ -0.24
IGKV3-34-201ENST00000521692 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
IGKV3-34-201ENST00000521692 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
IGKV3-34-201ENST00000521692 ZEB1P37275 1124 aaPredicted RBP13.47□□□□□ -0.25
IGKV3-34-201ENST00000521692 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
IGKV3-34-201ENST00000521692 PCGF6Q9BYE7 350 aa13.4□□□□□ -0.26
IGKV3-34-201ENST00000521692 TOP2AP11388 1531 aaKnown RBP13.37□□□□□ -0.27
IGKV3-34-201ENST00000521692 FOXD1Q16676 465 aa13.36□□□□□ -0.27
IGKV3-34-201ENST00000521692 EEA1Q15075 1411 aa13.34□□□□□ -0.27
IGKV3-34-201ENST00000521692 LOC105371045A0A1W2PR82 267 aa13.33□□□□□ -0.28
IGKV3-34-201ENST00000521692 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
IGKV3-34-201ENST00000521692 WIZO95785 1651 aa13.31□□□□□ -0.28
IGKV3-34-201ENST00000521692 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
IGKV3-34-201ENST00000521692 PPP6R1Q9UPN7 881 aa13.19□□□□□ -0.3
IGKV3-34-201ENST00000521692 WRNQ14191 1432 aaPredicted RBP eCLIP13.19□□□□□ -0.3
IGKV3-34-201ENST00000521692 SMARCA2P51531 1590 aa13.19□□□□□ -0.3
IGKV3-34-201ENST00000521692 ADRA2BP18089 450 aa13.18□□□□□ -0.3
IGKV3-34-201ENST00000521692 DNAJC5Q9H3Z4 198 aa13.18□□□□□ -0.3
IGKV3-34-201ENST00000521692 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
IGKV3-34-201ENST00000521692 TNIKQ9UKE5 1360 aa13.11□□□□□ -0.31
IGKV3-34-201ENST00000521692 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
IGKV3-34-201ENST00000521692 NCAPD3P42695 1498 aa13.08□□□□□ -0.32
IGKV3-34-201ENST00000521692 CUX2O14529 1486 aa13.07□□□□□ -0.32
IGKV3-34-201ENST00000521692 ATAD2BQ9ULI0 1458 aa13.04□□□□□ -0.32
IGKV3-34-201ENST00000521692 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
IGKV3-34-201ENST00000521692 HMGXB3Q12766 1538 aa13.01□□□□□ -0.33
IGKV3-34-201ENST00000521692 GOLGA3Q08378 1498 aa12.98□□□□□ -0.33
IGKV3-34-201ENST00000521692 NESP48681 1621 aa12.98□□□□□ -0.33
IGKV3-34-201ENST00000521692 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
IGKV3-34-201ENST00000521692 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
IGKV3-34-201ENST00000521692 KIF21BO75037 1637 aa12.96□□□□□ -0.33
IGKV3-34-201ENST00000521692 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
IGKV3-34-201ENST00000521692 CEP162Q5TB80 1403 aa12.94□□□□□ -0.34
IGKV3-34-201ENST00000521692 KIF21AQ7Z4S6 1674 aa12.91□□□□□ -0.34
IGKV3-34-201ENST00000521692 ABCC8Q09428 1581 aa12.9□□□□□ -0.34
IGKV3-34-201ENST00000521692 THOC2Q8NI27 1593 aaKnown RBP12.89□□□□□ -0.35
IGKV3-34-201ENST00000521692 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
IGKV3-34-201ENST00000521692 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
IGKV3-34-201ENST00000521692 SOGA1O94964 1423 aa12.86□□□□□ -0.35
IGKV3-34-201ENST00000521692 TOP2BQ02880 1626 aa12.83□□□□□ -0.36
IGKV3-34-201ENST00000521692 ERICH3Q5RHP9 1530 aa12.83□□□□□ -0.36
IGKV3-34-201ENST00000521692 BIVM-ERCC5R4GMW8 1640 aa12.8□□□□□ -0.36
IGKV3-34-201ENST00000521692 UBTFP17480 764 aaKnown RBP12.78□□□□□ -0.36
IGKV3-34-201ENST00000521692 SYNJ1O43426 1573 aa12.77□□□□□ -0.36
IGKV3-34-201ENST00000521692 CLSPNQ9HAW4 1339 aa12.77□□□□□ -0.37
IGKV3-34-201ENST00000521692 VPS8Q8N3P4 1428 aa12.77□□□□□ -0.37
IGKV3-34-201ENST00000521692 PDS5BQ9NTI5 1447 aa12.76□□□□□ -0.37
IGKV3-34-201ENST00000521692 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
IGKV3-34-201ENST00000521692 CLIP1P30622 1438 aa12.74□□□□□ -0.37
IGKV3-34-201ENST00000521692 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
IGKV3-34-201ENST00000521692 CFTRP13569 1480 aa12.72□□□□□ -0.37
IGKV3-34-201ENST00000521692 PRXQ9BXM0 1461 aa12.72□□□□□ -0.37
IGKV3-34-201ENST00000521692 APLP2Q06481 763 aa12.7□□□□□ -0.38
IGKV3-34-201ENST00000521692 RUSC2Q8N2Y8 1516 aa12.69□□□□□ -0.38
IGKV3-34-201ENST00000521692 MRC2Q9UBG0 1479 aa12.68□□□□□ -0.38
IGKV3-34-201ENST00000521692 KIF27Q86VH2 1401 aa12.68□□□□□ -0.38
IGKV3-34-201ENST00000521692 CADPSQ9ULU8 1353 aa12.68□□□□□ -0.38
IGKV3-34-201ENST00000521692 PIAS4Q8N2W9 510 aaPredicted RBP12.65□□□□□ -0.38
IGKV3-34-201ENST00000521692 WDR62O43379 1518 aa12.65□□□□□ -0.38
IGKV3-34-201ENST00000521692 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
IGKV3-34-201ENST00000521692 MAP3K1Q13233 1512 aa12.62□□□□□ -0.39
IGKV3-34-201ENST00000521692 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
IGKV3-34-201ENST00000521692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
IGKV3-34-201ENST00000521692 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.4
IGKV3-34-201ENST00000521692 FANCD2Q9BXW9 1451 aa12.58□□□□□ -0.4
IGKV3-34-201ENST00000521692 KCNA4P22459 653 aa12.56□□□□□ -0.4
IGKV3-34-201ENST00000521692 CUX1P39880 1505 aa12.56□□□□□ -0.4
IGKV3-34-201ENST00000521692 EHMT2Q96KQ7 1210 aa12.55□□□□□ -0.4
IGKV3-34-201ENST00000521692 ZNF316A6NFI3 1004 aaPredicted RBP12.54□□□□□ -0.4
IGKV3-34-201ENST00000521692 DIEXFQ68CQ4 756 aaKnown RBP12.53□□□□□ -0.4
IGKV3-34-201ENST00000521692 RRBP1Q9P2E9 1410 aaKnown RBP12.52□□□□□ -0.41
IGKV3-34-201ENST00000521692 URB2Q14146 1524 aaKnown RBP12.48□□□□□ -0.41
IGKV3-34-201ENST00000521692 ARAP1Q96P48 1450 aa12.47□□□□□ -0.41
IGKV3-34-201ENST00000521692 FHAD1B1AJZ9 1412 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms