RNA–Protein interactions for RNA: ENST00000453923.1

DDX39BP2-208, Transcript of DEAD-box helicase 39B pseudogene 2, humanhuman

BASIC

Gene DDX39BP2, Length 258 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39BP2-208ENST00000453923 AEBP2Q6ZN18 517 aaPredicted RBP21.34■■□□□ 1.01
DDX39BP2-208ENST00000453923 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
DDX39BP2-208ENST00000453923 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
DDX39BP2-208ENST00000453923 SENP3Q9H4L4 574 aaPredicted RBP18.09■□□□□ 0.49
DDX39BP2-208ENST00000453923 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
DDX39BP2-208ENST00000453923 FOXD1Q16676 465 aa16.78■□□□□ 0.28
DDX39BP2-208ENST00000453923 PPP6R1Q9UPN7 881 aa16.22■□□□□ 0.19
DDX39BP2-208ENST00000453923 ADRA2BP18089 450 aa16.21■□□□□ 0.19
DDX39BP2-208ENST00000453923 PIAS4Q8N2W9 510 aaPredicted RBP15.85■□□□□ 0.13
DDX39BP2-208ENST00000453923 MSH5O43196 834 aa15.44■□□□□ 0.06
DDX39BP2-208ENST00000453923 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
DDX39BP2-208ENST00000453923 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
DDX39BP2-208ENST00000453923 KCNA4P22459 653 aa14.79□□□□□ -0.04
DDX39BP2-208ENST00000453923 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
DDX39BP2-208ENST00000453923 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
DDX39BP2-208ENST00000453923 CNKSR2Q8WXI2 1034 aa14.57□□□□□ -0.08
DDX39BP2-208ENST00000453923 DMRT2Q9Y5R5 561 aa14.46□□□□□ -0.09
DDX39BP2-208ENST00000453923 NPM3O75607 178 aaKnown RBP14.45□□□□□ -0.1
DDX39BP2-208ENST00000453923 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
DDX39BP2-208ENST00000453923 HOXD11P31277 338 aaPredicted RBP14.19□□□□□ -0.14
DDX39BP2-208ENST00000453923 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
DDX39BP2-208ENST00000453923 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
DDX39BP2-208ENST00000453923 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
DDX39BP2-208ENST00000453923 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
DDX39BP2-208ENST00000453923 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
DDX39BP2-208ENST00000453923 ZBTB22O15209 634 aa13.62□□□□□ -0.23
DDX39BP2-208ENST00000453923 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
DDX39BP2-208ENST00000453923 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
DDX39BP2-208ENST00000453923 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
DDX39BP2-208ENST00000453923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.53□□□□□ -0.24
DDX39BP2-208ENST00000453923 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
DDX39BP2-208ENST00000453923 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
DDX39BP2-208ENST00000453923 RNF39Q9H2S5 420 aa13.24□□□□□ -0.29
DDX39BP2-208ENST00000453923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.17□□□□□ -0.3
DDX39BP2-208ENST00000453923 HNRNPUL2Q1KMD3 747 aaKnown RBP13.17□□□□□ -0.3
DDX39BP2-208ENST00000453923 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
DDX39BP2-208ENST00000453923 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
DDX39BP2-208ENST00000453923 C1QBPQ07021 282 aaKnown RBP13.08□□□□□ -0.32
DDX39BP2-208ENST00000453923 APLP2Q06481 763 aa13.01□□□□□ -0.33
DDX39BP2-208ENST00000453923 ATF5Q9Y2D1 282 aaPredicted RBP12.99□□□□□ -0.33
DDX39BP2-208ENST00000453923 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
DDX39BP2-208ENST00000453923 CAPN15O75808 1086 aa12.86□□□□□ -0.35
DDX39BP2-208ENST00000453923 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
DDX39BP2-208ENST00000453923 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
DDX39BP2-208ENST00000453923 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
DDX39BP2-208ENST00000453923 ABCB7O75027 752 aa12.63□□□□□ -0.39
DDX39BP2-208ENST00000453923 DSG3P32926 999 aa12.63□□□□□ -0.39
DDX39BP2-208ENST00000453923 POLA2Q14181 598 aa12.63□□□□□ -0.39
DDX39BP2-208ENST00000453923 ZBTB12Q9Y330 459 aaPredicted RBP12.44□□□□□ -0.42
DDX39BP2-208ENST00000453923 FBLN2P98095 1184 aa12.43□□□□□ -0.42
DDX39BP2-208ENST00000453923 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
DDX39BP2-208ENST00000453923 FKBP8Q14318 412 aa12.29□□□□□ -0.44
DDX39BP2-208ENST00000453923 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
DDX39BP2-208ENST00000453923 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
DDX39BP2-208ENST00000453923 SPDYE2BA6NHP3 402 aa12.11□□□□□ -0.47
DDX39BP2-208ENST00000453923 SPDYE6P0CI01 402 aa12.11□□□□□ -0.47
DDX39BP2-208ENST00000453923 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
DDX39BP2-208ENST00000453923 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
DDX39BP2-208ENST00000453923 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
DDX39BP2-208ENST00000453923 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
DDX39BP2-208ENST00000453923 PROM2Q8N271 834 aa12.01□□□□□ -0.49
DDX39BP2-208ENST00000453923 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDX39BP2-208ENST00000453923 AKT1S1Q96B36 256 aa11.9□□□□□ -0.5
DDX39BP2-208ENST00000453923 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
DDX39BP2-208ENST00000453923 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
DDX39BP2-208ENST00000453923 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
DDX39BP2-208ENST00000453923 STAG3Q9UJ98 1225 aa11.73□□□□□ -0.53
DDX39BP2-208ENST00000453923 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
DDX39BP2-208ENST00000453923 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
DDX39BP2-208ENST00000453923 PITPNM1O00562 1244 aa11.66□□□□□ -0.54
DDX39BP2-208ENST00000453923 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
DDX39BP2-208ENST00000453923 MIER1Q8N108 512 aa11.54□□□□□ -0.56
DDX39BP2-208ENST00000453923 PLCD3Q8N3E9 789 aa11.54□□□□□ -0.56
DDX39BP2-208ENST00000453923 IFNLR1Q8IU57 520 aaPredicted RBP11.52□□□□□ -0.57
DDX39BP2-208ENST00000453923 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
DDX39BP2-208ENST00000453923 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
DDX39BP2-208ENST00000453923 CREBZFQ9NS37 354 aa11.46□□□□□ -0.57
DDX39BP2-208ENST00000453923 KLHL34Q8N239 644 aa11.44□□□□□ -0.58
DDX39BP2-208ENST00000453923 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
DDX39BP2-208ENST00000453923 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
DDX39BP2-208ENST00000453923 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
DDX39BP2-208ENST00000453923 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
DDX39BP2-208ENST00000453923 PRKAR2AP13861 404 aaKnown RBP11.36□□□□□ -0.59
DDX39BP2-208ENST00000453923 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
DDX39BP2-208ENST00000453923 AMER1Q5JTC6 1135 aaPredicted RBP11.36□□□□□ -0.59
DDX39BP2-208ENST00000453923 SPOCK2Q92563 424 aa11.36□□□□□ -0.59
DDX39BP2-208ENST00000453923 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
DDX39BP2-208ENST00000453923 FARP1Q9Y4F1 1045 aaPredicted RBP11.28□□□□□ -0.6
DDX39BP2-208ENST00000453923 NPM1P06748 294 aaKnown RBP eCLIP11.26□□□□□ -0.61
DDX39BP2-208ENST00000453923 NUBP1P53384 320 aa11.25□□□□□ -0.61
DDX39BP2-208ENST00000453923 RASEFQ8IZ41 740 aa11.19□□□□□ -0.62
DDX39BP2-208ENST00000453923 PKD2Q13563 968 aa11.17□□□□□ -0.62
DDX39BP2-208ENST00000453923 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
DDX39BP2-208ENST00000453923 CIZ1Q9ULV3 898 aaPredicted RBP11.16□□□□□ -0.62
DDX39BP2-208ENST00000453923 GSE1Q14687 1217 aa11.13□□□□□ -0.63
DDX39BP2-208ENST00000453923 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
DDX39BP2-208ENST00000453923 TSPYL2Q9H2G4 693 aaPredicted RBP11.09□□□□□ -0.63
DDX39BP2-208ENST00000453923 ECM2O94769 699 aaPredicted RBP11.08□□□□□ -0.64
DDX39BP2-208ENST00000453923 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
DDX39BP2-208ENST00000453923 PAK3O75914 559 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms