Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 NEK2P4-201ENST00000425793 1329 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AL512310.3-201ENST00000547023 1335 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 IPO7P2-201ENST00000451446 1750 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 CLUHP1-201ENST00000435012 1190 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AC090115.2-201ENST00000548060 883 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AC079315.1-201ENST00000602952 623 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 AC010478.1-201ENST00000601500 6762 ntBASIC8.32□□□□□ -1.08
SCN11AQ9UI33 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 MIR541-201ENST00000401360 84 ntBASIC8.32□□□□□ -1.08
SCN11AQ9UI33 AC003989.1-201ENST00000434569 565 ntBASIC8.32□□□□□ -1.08
SCN11AQ9UI33 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 IGLV3-6-201ENST00000523937 250 ntBASIC8.32□□□□□ -1.08
SCN11AQ9UI33 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC8.32□□□□□ -1.08
SCN11AQ9UI33 AP001437.1-201ENST00000608783 456 ntBASIC8.32□□□□□ -1.08
SCN11AQ9UI33 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 CLCA3P-203ENST00000490028 2781 ntBASIC8.32□□□□□ -1.08
SCN11AQ9UI33 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCN11AQ9UI33 AC007485.2-201ENST00000623493 1667 ntBASIC8.32□□□□□ -1.08
SCN11AQ9UI33 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 RNA5SP273-201ENST00000362484 113 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 AC004386.1-201ENST00000393214 761 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 AL133351.3-201ENST00000454998 193 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 RN7SL214P-201ENST00000487317 265 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 UGT2A3P7-201ENST00000510485 734 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 AL138895.2-201ENST00000603019 178 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 AL359704.2-201ENST00000604335 521 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 TSHZ2-205ENST00000626626 670 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 CDY10P-201ENST00000452415 1567 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 AL139384.2-201ENST00000613809 3590 ntBASIC8.31□□□□□ -1.08
SCN11AQ9UI33 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCN11AQ9UI33 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 MFSD8-217ENST00000641178 4374 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 RNA5SP477-201ENST00000362639 119 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 MIR130B-202ENST00000385018 82 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms