RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 AEBP2Q6ZN18 517 aaPredicted RBP30.27■■■□□ 2.44
TVP23B-209ENST00000581733 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
TVP23B-209ENST00000581733 SENP3Q9H4L4 574 aaPredicted RBP25.86■■□□□ 1.73
TVP23B-209ENST00000581733 PHF23Q9BUL5 403 aaPredicted RBP25.49■■□□□ 1.67
TVP23B-209ENST00000581733 FOXD1Q16676 465 aa24.19■■□□□ 1.46
TVP23B-209ENST00000581733 POTEDQ86YR6 584 aa22.98■■□□□ 1.27
TVP23B-209ENST00000581733 MSH5O43196 834 aa22.76■■□□□ 1.23
TVP23B-209ENST00000581733 PIAS4Q8N2W9 510 aaPredicted RBP22.53■■□□□ 1.2
TVP23B-209ENST00000581733 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
TVP23B-209ENST00000581733 PPP6R1Q9UPN7 881 aa22.3■■□□□ 1.16
TVP23B-209ENST00000581733 ADRA2BP18089 450 aa22.23■■□□□ 1.15
TVP23B-209ENST00000581733 MAPK8IP2Q13387 824 aaPredicted RBP20.56■□□□□ 0.88
TVP23B-209ENST00000581733 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
TVP23B-209ENST00000581733 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
TVP23B-209ENST00000581733 CACNB1Q02641 598 aaPredicted RBP19.86■□□□□ 0.77
TVP23B-209ENST00000581733 DCAF8L1A6NGE4 600 aa19.76■□□□□ 0.75
TVP23B-209ENST00000581733 PPP4R3CPQ6ZMV5 832 aa19.63■□□□□ 0.73
TVP23B-209ENST00000581733 HOXD11P31277 338 aaPredicted RBP19.49■□□□□ 0.71
TVP23B-209ENST00000581733 RNF39Q9H2S5 420 aa19.38■□□□□ 0.69
TVP23B-209ENST00000581733 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
TVP23B-209ENST00000581733 RNF216Q9NWF9 866 aaPredicted RBP19.24■□□□□ 0.67
TVP23B-209ENST00000581733 C1QBPQ07021 282 aaKnown RBP19.06■□□□□ 0.64
TVP23B-209ENST00000581733 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
TVP23B-209ENST00000581733 NCBP3Q53F19 620 aaKnown RBP18.73■□□□□ 0.59
TVP23B-209ENST00000581733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.58
TVP23B-209ENST00000581733 NPM3O75607 178 aaKnown RBP18.47■□□□□ 0.55
TVP23B-209ENST00000581733 U3KPZ7 1027 aaPredicted RBP18.19■□□□□ 0.5
TVP23B-209ENST00000581733 CAPN15O75808 1086 aa18.1■□□□□ 0.49
TVP23B-209ENST00000581733 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
TVP23B-209ENST00000581733 DSG3P32926 999 aa18.03■□□□□ 0.48
TVP23B-209ENST00000581733 POTEHQ6S545 545 aa17.92■□□□□ 0.46
TVP23B-209ENST00000581733 KCNA4P22459 653 aa17.78■□□□□ 0.44
TVP23B-209ENST00000581733 SLC4A2P04920 1241 aa17.75■□□□□ 0.43
TVP23B-209ENST00000581733 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
TVP23B-209ENST00000581733 ABCB7O75027 752 aa17.66■□□□□ 0.42
TVP23B-209ENST00000581733 APLP2Q06481 763 aa17.6■□□□□ 0.41
TVP23B-209ENST00000581733 ZNF219Q9P2Y4 722 aaPredicted RBP17.59■□□□□ 0.41
TVP23B-209ENST00000581733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.49■□□□□ 0.39
TVP23B-209ENST00000581733 HNRNPUL2Q1KMD3 747 aaKnown RBP17.49■□□□□ 0.39
TVP23B-209ENST00000581733 SAMD1Q6SPF0 538 aaPredicted RBP17.38■□□□□ 0.37
TVP23B-209ENST00000581733 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
TVP23B-209ENST00000581733 POLA2Q14181 598 aa17.11■□□□□ 0.33
TVP23B-209ENST00000581733 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
TVP23B-209ENST00000581733 CHRDL2Q6WN34 429 aa17.03■□□□□ 0.32
TVP23B-209ENST00000581733 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
TVP23B-209ENST00000581733 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
TVP23B-209ENST00000581733 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
TVP23B-209ENST00000581733 FOXD4L1Q9NU39 408 aa16.68■□□□□ 0.26
TVP23B-209ENST00000581733 ZBTB12Q9Y330 459 aaPredicted RBP16.66■□□□□ 0.26
TVP23B-209ENST00000581733 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
TVP23B-209ENST00000581733 SP7Q8TDD2 431 aaPredicted RBP16.6■□□□□ 0.25
TVP23B-209ENST00000581733 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
TVP23B-209ENST00000581733 PIP4P2Q8N4L2 257 aa16.53■□□□□ 0.24
TVP23B-209ENST00000581733 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
TVP23B-209ENST00000581733 HAX1O00165 279 aa16.39■□□□□ 0.21
TVP23B-209ENST00000581733 ZBTB22O15209 634 aa16.32■□□□□ 0.2
TVP23B-209ENST00000581733 FXR2P51116 673 aaKnown RBP eCLIP16.32■□□□□ 0.2
TVP23B-209ENST00000581733 ATXN8OSP0DMR3 200 aa16.15■□□□□ 0.18
TVP23B-209ENST00000581733 EVX2Q03828 476 aa16.14■□□□□ 0.17
TVP23B-209ENST00000581733 SPDYE2BA6NHP3 402 aa16.12■□□□□ 0.17
TVP23B-209ENST00000581733 SPDYE6P0CI01 402 aa16.12■□□□□ 0.17
TVP23B-209ENST00000581733 FBLN2P98095 1184 aa16.12■□□□□ 0.17
TVP23B-209ENST00000581733 SPDYE2Q495Y8 402 aa16.12■□□□□ 0.17
TVP23B-209ENST00000581733 CLEC11AQ9Y240 323 aa16.05■□□□□ 0.16
TVP23B-209ENST00000581733 PRKAR2AP13861 404 aaKnown RBP16.02■□□□□ 0.16
TVP23B-209ENST00000581733 SPDYE1Q8NFV5 336 aaPredicted RBP15.97■□□□□ 0.15
TVP23B-209ENST00000581733 MKRN4PQ13434 485 aaPredicted RBP15.95■□□□□ 0.14
TVP23B-209ENST00000581733 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
TVP23B-209ENST00000581733 SSUH2Q9Y2M2 353 aa15.85■□□□□ 0.13
TVP23B-209ENST00000581733 C19orf67A6NJJ6 358 aa15.82■□□□□ 0.12
TVP23B-209ENST00000581733 CHADLQ6NUI6 762 aa15.77■□□□□ 0.12
TVP23B-209ENST00000581733 GABBR2O75899 941 aa15.73■□□□□ 0.11
TVP23B-209ENST00000581733 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
TVP23B-209ENST00000581733 PRR29P0C7W0 189 aa15.67■□□□□ 0.1
TVP23B-209ENST00000581733 LHX8Q68G74 356 aa15.58■□□□□ 0.08
TVP23B-209ENST00000581733 CD44P16070 742 aaKnown RBP15.48■□□□□ 0.07
TVP23B-209ENST00000581733 FARP1Q9Y4F1 1045 aaPredicted RBP15.45■□□□□ 0.06
TVP23B-209ENST00000581733 POTEIP0CG38 1075 aa15.38■□□□□ 0.05
TVP23B-209ENST00000581733 DCBLD2Q96PD2 775 aa15.25■□□□□ 0.03
TVP23B-209ENST00000581733 CLCN6P51797 869 aa15.23■□□□□ 0.03
TVP23B-209ENST00000581733 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
TVP23B-209ENST00000581733 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
TVP23B-209ENST00000581733 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
TVP23B-209ENST00000581733 CREBZFQ9NS37 354 aa15.16■□□□□ 0.02
TVP23B-209ENST00000581733 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
TVP23B-209ENST00000581733 GALR2O43603 387 aaPredicted RBP15.07■□□□□ 0
TVP23B-209ENST00000581733 PLSCR2Q9NRY7 297 aa15.02■□□□□ -0
TVP23B-209ENST00000581733 SPDYE4A6NLX3 237 aa15□□□□□ -0.01
TVP23B-209ENST00000581733 PAK3O75914 559 aaPredicted RBP14.98□□□□□ -0.01
TVP23B-209ENST00000581733 PHF12Q96QT6 1004 aa14.98□□□□□ -0.01
TVP23B-209ENST00000581733 OTUD5Q96G74 571 aa14.9□□□□□ -0.02
TVP23B-209ENST00000581733 POTEB2H3BUK9 544 aa14.88□□□□□ -0.03
TVP23B-209ENST00000581733 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
TVP23B-209ENST00000581733 EHMT2Q96KQ7 1210 aa14.85□□□□□ -0.03
TVP23B-209ENST00000581733 MNX1P50219 401 aaPredicted RBP14.81□□□□□ -0.04
TVP23B-209ENST00000581733 PELP1Q8IZL8 1130 aaKnown RBP14.81□□□□□ -0.04
TVP23B-209ENST00000581733 MS4A3Q96HJ5 214 aa14.74□□□□□ -0.05
TVP23B-209ENST00000581733 POTEMA6NI47 508 aa14.7□□□□□ -0.06
TVP23B-209ENST00000581733 METRNQ9UJH8 293 aa14.7□□□□□ -0.06
TVP23B-209ENST00000581733 ASTLQ6HA08 431 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms