RNA–Protein interactions for RNA: ENST00000368934.1

PRUNE1-202, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 2 BASIC

Gene PRUNE1, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-202ENST00000368934 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
PRUNE1-202ENST00000368934 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
PRUNE1-202ENST00000368934 NISCHQ9Y2I1 1504 aa14.44□□□□□ -0.1
PRUNE1-202ENST00000368934 PHF23Q9BUL5 403 aaPredicted RBP13.88□□□□□ -0.19
PRUNE1-202ENST00000368934 SENP3Q9H4L4 574 aaPredicted RBP13.53□□□□□ -0.24
PRUNE1-202ENST00000368934 PLPPR3Q6T4P5 718 aa12.78□□□□□ -0.36
PRUNE1-202ENST00000368934 FOXD1Q16676 465 aa12.6□□□□□ -0.39
PRUNE1-202ENST00000368934 POTEDQ86YR6 584 aa12.53□□□□□ -0.4
PRUNE1-202ENST00000368934 CCDC180Q9P1Z9 1646 aa12.35□□□□□ -0.43
PRUNE1-202ENST00000368934 SHROOM4Q9ULL8 1493 aa12.24□□□□□ -0.45
PRUNE1-202ENST00000368934 PPP6R1Q9UPN7 881 aa12.23□□□□□ -0.45
PRUNE1-202ENST00000368934 ZCCHC6Q5VYS8 1495 aaKnown RBP12.22□□□□□ -0.45
PRUNE1-202ENST00000368934 ADRA2BP18089 450 aa12.21□□□□□ -0.45
PRUNE1-202ENST00000368934 ABCC9O60706 1549 aa12.19□□□□□ -0.46
PRUNE1-202ENST00000368934 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
PRUNE1-202ENST00000368934 SUPT5HO00267 1087 aaKnown RBP11.99□□□□□ -0.49
PRUNE1-202ENST00000368934 DCAF8L2P0C7V8 631 aa11.92□□□□□ -0.5
PRUNE1-202ENST00000368934 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
PRUNE1-202ENST00000368934 DCAF1Q9Y4B6 1507 aa11.88□□□□□ -0.51
PRUNE1-202ENST00000368934 HRCP23327 699 aa11.81□□□□□ -0.52
PRUNE1-202ENST00000368934 MYT1Q01538 1121 aa11.67□□□□□ -0.54
PRUNE1-202ENST00000368934 MYO15BQ96JP2 1530 aa11.61□□□□□ -0.55
PRUNE1-202ENST00000368934 DNAJC5BQ9UF47 199 aa11.55□□□□□ -0.56
PRUNE1-202ENST00000368934 MSH5O43196 834 aa11.54□□□□□ -0.56
PRUNE1-202ENST00000368934 SCRIBQ14160 1630 aa11.53□□□□□ -0.56
PRUNE1-202ENST00000368934 RB1CC1Q8TDY2 1594 aa11.5□□□□□ -0.57
PRUNE1-202ENST00000368934 UNC13AQ9UPW8 1703 aa11.44□□□□□ -0.58
PRUNE1-202ENST00000368934 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
PRUNE1-202ENST00000368934 RSF1Q96T23 1441 aaPredicted RBP11.4□□□□□ -0.58
PRUNE1-202ENST00000368934 NACADO15069 1562 aa11.39□□□□□ -0.59
PRUNE1-202ENST00000368934 BICRAQ9NZM4 1560 aa11.3□□□□□ -0.6
PRUNE1-202ENST00000368934 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
PRUNE1-202ENST00000368934 PCGF6Q9BYE7 350 aa11.29□□□□□ -0.6
PRUNE1-202ENST00000368934 PPP4R3CPQ6ZMV5 832 aa11.29□□□□□ -0.6
PRUNE1-202ENST00000368934 PABPN1Q86U42 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRUNE1-202ENST00000368934 LOC105371045A0A1W2PR82 267 aa11.28□□□□□ -0.6
PRUNE1-202ENST00000368934 CECR2Q9BXF3 1484 aa11.23□□□□□ -0.61
PRUNE1-202ENST00000368934 MROH2BQ7Z745 1585 aa11.21□□□□□ -0.61
PRUNE1-202ENST00000368934 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
PRUNE1-202ENST00000368934 KCNA4P22459 653 aa11.19□□□□□ -0.62
PRUNE1-202ENST00000368934 WIZO95785 1651 aa11.17□□□□□ -0.62
PRUNE1-202ENST00000368934 BAZ1AQ9NRL2 1556 aaPredicted RBP11.12□□□□□ -0.63
PRUNE1-202ENST00000368934 TTBK1Q5TCY1 1321 aaPredicted RBP11.09□□□□□ -0.63
PRUNE1-202ENST00000368934 TRIM26Q12899 539 aaPredicted RBP11.07□□□□□ -0.64
PRUNE1-202ENST00000368934 FAM9AQ8IZU1 332 aaPredicted RBP11.07□□□□□ -0.64
PRUNE1-202ENST00000368934 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
PRUNE1-202ENST00000368934 ZEB1P37275 1124 aaPredicted RBP11.05□□□□□ -0.64
PRUNE1-202ENST00000368934 CC2D2AQ9P2K1 1620 aa11.03□□□□□ -0.64
PRUNE1-202ENST00000368934 SMARCA4P51532 1647 aa11.02□□□□□ -0.64
PRUNE1-202ENST00000368934 EIF4G1Q04637 1599 aaKnown RBP11.02□□□□□ -0.65
PRUNE1-202ENST00000368934 TOP2AP11388 1531 aaKnown RBP11.01□□□□□ -0.65
PRUNE1-202ENST00000368934 ACIN1Q9UKV3 1341 aaKnown RBP10.97□□□□□ -0.65
PRUNE1-202ENST00000368934 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
PRUNE1-202ENST00000368934 EHMT2Q96KQ7 1210 aa10.96□□□□□ -0.65
PRUNE1-202ENST00000368934 SMARCA2P51531 1590 aa10.94□□□□□ -0.66
PRUNE1-202ENST00000368934 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
PRUNE1-202ENST00000368934 CCDC88BA6NC98 1476 aa10.93□□□□□ -0.66
PRUNE1-202ENST00000368934 ABCC8Q09428 1581 aa10.9□□□□□ -0.66
PRUNE1-202ENST00000368934 NPM3O75607 178 aaKnown RBP10.88□□□□□ -0.67
PRUNE1-202ENST00000368934 NEUROD1Q13562 356 aa10.86□□□□□ -0.67
PRUNE1-202ENST00000368934 GTF3C3Q9Y5Q9 886 aa10.84□□□□□ -0.67
PRUNE1-202ENST00000368934 DMRT2Q9Y5R5 561 aa10.82□□□□□ -0.68
PRUNE1-202ENST00000368934 PEG3Q9GZU2 1588 aa10.82□□□□□ -0.68
PRUNE1-202ENST00000368934 CENPBP07199 599 aaPredicted RBP10.8□□□□□ -0.68
PRUNE1-202ENST00000368934 SOGA1O94964 1423 aa10.77□□□□□ -0.69
PRUNE1-202ENST00000368934 EEA1Q15075 1411 aa10.76□□□□□ -0.69
PRUNE1-202ENST00000368934 CEP162Q5TB80 1403 aa10.73□□□□□ -0.69
PRUNE1-202ENST00000368934 WRNQ14191 1432 aaPredicted RBP eCLIP10.72□□□□□ -0.69
PRUNE1-202ENST00000368934 ATAD2BQ9ULI0 1458 aa10.72□□□□□ -0.69
PRUNE1-202ENST00000368934 RUSC2Q8N2Y8 1516 aa10.71□□□□□ -0.69
PRUNE1-202ENST00000368934 TNIKQ9UKE5 1360 aa10.71□□□□□ -0.69
PRUNE1-202ENST00000368934 BCL11AQ9H165 835 aa10.71□□□□□ -0.69
PRUNE1-202ENST00000368934 CSRNP3Q8WYN3 585 aa10.7□□□□□ -0.7
PRUNE1-202ENST00000368934 BAZ1BQ9UIG0 1483 aaKnown RBP10.7□□□□□ -0.7
PRUNE1-202ENST00000368934 RNF216Q9NWF9 866 aaPredicted RBP10.7□□□□□ -0.7
PRUNE1-202ENST00000368934 SYNJ1O43426 1573 aa10.68□□□□□ -0.7
PRUNE1-202ENST00000368934 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
PRUNE1-202ENST00000368934 UBTFP17480 764 aaKnown RBP10.66□□□□□ -0.7
PRUNE1-202ENST00000368934 HOXD11P31277 338 aaPredicted RBP10.64□□□□□ -0.71
PRUNE1-202ENST00000368934 SLC4A1APQ9BWU0 796 aaKnown RBP10.63□□□□□ -0.71
PRUNE1-202ENST00000368934 KIF21BO75037 1637 aa10.62□□□□□ -0.71
PRUNE1-202ENST00000368934 CEP164Q9UPV0 1460 aa10.62□□□□□ -0.71
PRUNE1-202ENST00000368934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.62□□□□□ -0.71
PRUNE1-202ENST00000368934 CCER1Q8TC90 406 aaPredicted RBP10.61□□□□□ -0.71
PRUNE1-202ENST00000368934 DIEXFQ68CQ4 756 aaKnown RBP10.57□□□□□ -0.72
PRUNE1-202ENST00000368934 TOP2BQ02880 1626 aa10.57□□□□□ -0.72
PRUNE1-202ENST00000368934 HMGXB3Q12766 1538 aa10.54□□□□□ -0.72
PRUNE1-202ENST00000368934 DNAJC5Q9H3Z4 198 aa10.54□□□□□ -0.72
PRUNE1-202ENST00000368934 BIVM-ERCC5R4GMW8 1640 aa10.54□□□□□ -0.72
PRUNE1-202ENST00000368934 ANP32EQ9BTT0 268 aa10.54□□□□□ -0.72
PRUNE1-202ENST00000368934 CLIP1P30622 1438 aa10.54□□□□□ -0.72
PRUNE1-202ENST00000368934 PRKCSHP14314 528 aaPredicted RBP10.53□□□□□ -0.72
PRUNE1-202ENST00000368934 RAPGEF2Q9Y4G8 1499 aa10.53□□□□□ -0.72
PRUNE1-202ENST00000368934 NCAPD3P42695 1498 aa10.52□□□□□ -0.73
PRUNE1-202ENST00000368934 VPS8Q8N3P4 1428 aa10.5□□□□□ -0.73
PRUNE1-202ENST00000368934 NESP48681 1621 aa10.49□□□□□ -0.73
PRUNE1-202ENST00000368934 CUX2O14529 1486 aa10.47□□□□□ -0.73
PRUNE1-202ENST00000368934 ERICH3Q5RHP9 1530 aa10.46□□□□□ -0.74
PRUNE1-202ENST00000368934 CUX1P39880 1505 aa10.45□□□□□ -0.74
PRUNE1-202ENST00000368934 ERCC6Q03468 1493 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms