RNA–Protein interactions for RNA: ENST00000574031.1

NOVA1-213, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 2 BASIC

Gene NOVA1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-213ENST00000574031 AEBP2Q6ZN18 517 aaPredicted RBP26.49■■□□□ 1.83
NOVA1-213ENST00000574031 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
NOVA1-213ENST00000574031 SENP3Q9H4L4 574 aaPredicted RBP22.77■■□□□ 1.24
NOVA1-213ENST00000574031 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
NOVA1-213ENST00000574031 FOXD1Q16676 465 aa21.21■□□□□ 0.99
NOVA1-213ENST00000574031 POTEDQ86YR6 584 aa20.19■□□□□ 0.82
NOVA1-213ENST00000574031 MSH5O43196 834 aa20.09■□□□□ 0.81
NOVA1-213ENST00000574031 PIAS4Q8N2W9 510 aaPredicted RBP19.74■□□□□ 0.75
NOVA1-213ENST00000574031 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
NOVA1-213ENST00000574031 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
NOVA1-213ENST00000574031 ADRA2BP18089 450 aa19.41■□□□□ 0.7
NOVA1-213ENST00000574031 DMRT2Q9Y5R5 561 aa17.98■□□□□ 0.47
NOVA1-213ENST00000574031 MAPK8IP2Q13387 824 aaPredicted RBP17.93■□□□□ 0.46
NOVA1-213ENST00000574031 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
NOVA1-213ENST00000574031 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
NOVA1-213ENST00000574031 DCAF8L1A6NGE4 600 aa17.22■□□□□ 0.35
NOVA1-213ENST00000574031 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
NOVA1-213ENST00000574031 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
NOVA1-213ENST00000574031 RNF39Q9H2S5 420 aa17.04■□□□□ 0.32
NOVA1-213ENST00000574031 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
NOVA1-213ENST00000574031 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
NOVA1-213ENST00000574031 C1QBPQ07021 282 aaKnown RBP16.83■□□□□ 0.28
NOVA1-213ENST00000574031 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
NOVA1-213ENST00000574031 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
NOVA1-213ENST00000574031 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.21
NOVA1-213ENST00000574031 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
NOVA1-213ENST00000574031 U3KPZ7 1027 aaPredicted RBP15.93■□□□□ 0.14
NOVA1-213ENST00000574031 CAPN15O75808 1086 aa15.83■□□□□ 0.12
NOVA1-213ENST00000574031 DSG3P32926 999 aa15.82■□□□□ 0.12
NOVA1-213ENST00000574031 SPINK5Q9NQ38 1064 aaPredicted RBP15.78■□□□□ 0.12
NOVA1-213ENST00000574031 POTEHQ6S545 545 aa15.77■□□□□ 0.11
NOVA1-213ENST00000574031 NISCHQ9Y2I1 1504 aa15.74■□□□□ 0.11
NOVA1-213ENST00000574031 APLP2Q06481 763 aa15.59■□□□□ 0.09
NOVA1-213ENST00000574031 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
NOVA1-213ENST00000574031 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
NOVA1-213ENST00000574031 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
NOVA1-213ENST00000574031 KCNA4P22459 653 aa15.46■□□□□ 0.07
NOVA1-213ENST00000574031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
NOVA1-213ENST00000574031 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
NOVA1-213ENST00000574031 ABCB7O75027 752 aa15.38■□□□□ 0.05
NOVA1-213ENST00000574031 SAMD1Q6SPF0 538 aaPredicted RBP15.32■□□□□ 0.04
NOVA1-213ENST00000574031 RBM42Q9BTD8 480 aaKnown RBP15.19■□□□□ 0.02
NOVA1-213ENST00000574031 MYCNP04198 464 aaPredicted RBP15□□□□□ -0.01
NOVA1-213ENST00000574031 POLA2Q14181 598 aa14.98□□□□□ -0.01
NOVA1-213ENST00000574031 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
NOVA1-213ENST00000574031 ABCC9O60706 1549 aa14.86□□□□□ -0.03
NOVA1-213ENST00000574031 AKT1S1Q96B36 256 aa14.73□□□□□ -0.05
NOVA1-213ENST00000574031 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
NOVA1-213ENST00000574031 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
NOVA1-213ENST00000574031 SP7Q8TDD2 431 aaPredicted RBP14.6□□□□□ -0.07
NOVA1-213ENST00000574031 ATF5Q9Y2D1 282 aaPredicted RBP14.59□□□□□ -0.07
NOVA1-213ENST00000574031 SLC4A1APQ9BWU0 796 aaKnown RBP14.57□□□□□ -0.08
NOVA1-213ENST00000574031 REM2Q8IYK8 340 aaPredicted RBP14.55□□□□□ -0.08
NOVA1-213ENST00000574031 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
NOVA1-213ENST00000574031 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
NOVA1-213ENST00000574031 PITPNM1O00562 1244 aa14.39□□□□□ -0.11
NOVA1-213ENST00000574031 FXR2P51116 673 aaKnown RBP eCLIP14.37□□□□□ -0.11
NOVA1-213ENST00000574031 CCDC180Q9P1Z9 1646 aa14.36□□□□□ -0.11
NOVA1-213ENST00000574031 HAX1O00165 279 aa14.35□□□□□ -0.11
NOVA1-213ENST00000574031 ATXN8OSP0DMR3 200 aa14.27□□□□□ -0.12
NOVA1-213ENST00000574031 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
NOVA1-213ENST00000574031 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
NOVA1-213ENST00000574031 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
NOVA1-213ENST00000574031 ZBTB22O15209 634 aa14.17□□□□□ -0.14
NOVA1-213ENST00000574031 FBLN2P98095 1184 aa14.17□□□□□ -0.14
NOVA1-213ENST00000574031 EVX2Q03828 476 aa14.07□□□□□ -0.16
NOVA1-213ENST00000574031 SPDYE1Q8NFV5 336 aaPredicted RBP14.06□□□□□ -0.16
NOVA1-213ENST00000574031 PRKAR2AP13861 404 aaKnown RBP14.02□□□□□ -0.16
NOVA1-213ENST00000574031 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
NOVA1-213ENST00000574031 RB1CC1Q8TDY2 1594 aa13.95□□□□□ -0.18
NOVA1-213ENST00000574031 ZNF692Q9BU19 519 aaPredicted RBP13.95□□□□□ -0.18
NOVA1-213ENST00000574031 SSUH2Q9Y2M2 353 aa13.93□□□□□ -0.18
NOVA1-213ENST00000574031 C19orf67A6NJJ6 358 aa13.92□□□□□ -0.18
NOVA1-213ENST00000574031 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
NOVA1-213ENST00000574031 GABBR2O75899 941 aa13.8□□□□□ -0.2
NOVA1-213ENST00000574031 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
NOVA1-213ENST00000574031 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
NOVA1-213ENST00000574031 NACADO15069 1562 aa13.74□□□□□ -0.21
NOVA1-213ENST00000574031 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
NOVA1-213ENST00000574031 LHX8Q68G74 356 aa13.7□□□□□ -0.22
NOVA1-213ENST00000574031 DNAJC5Q9H3Z4 198 aa13.7□□□□□ -0.22
NOVA1-213ENST00000574031 CLCN6P51797 869 aa13.59□□□□□ -0.23
NOVA1-213ENST00000574031 CD44P16070 742 aaKnown RBP13.56□□□□□ -0.24
NOVA1-213ENST00000574031 FARP1Q9Y4F1 1045 aaPredicted RBP13.55□□□□□ -0.24
NOVA1-213ENST00000574031 UNC13AQ9UPW8 1703 aa13.54□□□□□ -0.24
NOVA1-213ENST00000574031 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
NOVA1-213ENST00000574031 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
NOVA1-213ENST00000574031 CECR2Q9BXF3 1484 aa13.47□□□□□ -0.25
NOVA1-213ENST00000574031 POTEIP0CG38 1075 aa13.46□□□□□ -0.26
NOVA1-213ENST00000574031 CC2D2AQ9P2K1 1620 aa13.4□□□□□ -0.26
NOVA1-213ENST00000574031 MYO15BQ96JP2 1530 aa13.4□□□□□ -0.26
NOVA1-213ENST00000574031 SHROOM4Q9ULL8 1493 aa13.38□□□□□ -0.27
NOVA1-213ENST00000574031 DCBLD2Q96PD2 775 aa13.38□□□□□ -0.27
NOVA1-213ENST00000574031 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
NOVA1-213ENST00000574031 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
NOVA1-213ENST00000574031 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
NOVA1-213ENST00000574031 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
NOVA1-213ENST00000574031 EIF4G1Q04637 1599 aaKnown RBP13.25□□□□□ -0.29
NOVA1-213ENST00000574031 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.3
NOVA1-213ENST00000574031 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms