RNA–Protein interactions for RNA: ENST00000427716.6

FGD4-202, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FGD4, Length 8,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-202ENST00000427716 NISCHQ9Y2I1 1504 aa13.67□□□□□ -0.22
FGD4-202ENST00000427716 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
FGD4-202ENST00000427716 MYT1Q01538 1121 aa12.29□□□□□ -0.44
FGD4-202ENST00000427716 ZEB1P37275 1124 aaPredicted RBP12.23□□□□□ -0.45
FGD4-202ENST00000427716 DCAF8L2P0C7V8 631 aa12.15□□□□□ -0.46
FGD4-202ENST00000427716 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
FGD4-202ENST00000427716 CCDC180Q9P1Z9 1646 aa12□□□□□ -0.49
FGD4-202ENST00000427716 SHROOM4Q9ULL8 1493 aa11.9□□□□□ -0.5
FGD4-202ENST00000427716 CENPBP07199 599 aaPredicted RBP11.87□□□□□ -0.51
FGD4-202ENST00000427716 APLP2Q06481 763 aa11.75□□□□□ -0.53
FGD4-202ENST00000427716 CCER1Q8TC90 406 aaPredicted RBP11.69□□□□□ -0.54
FGD4-202ENST00000427716 TRIM26Q12899 539 aaPredicted RBP11.66□□□□□ -0.54
FGD4-202ENST00000427716 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
FGD4-202ENST00000427716 HRCP23327 699 aa11.64□□□□□ -0.55
FGD4-202ENST00000427716 FAM9AQ8IZU1 332 aaPredicted RBP11.57□□□□□ -0.56
FGD4-202ENST00000427716 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
FGD4-202ENST00000427716 ZCCHC6Q5VYS8 1495 aaKnown RBP11.5□□□□□ -0.57
FGD4-202ENST00000427716 DCAF1Q9Y4B6 1507 aa11.49□□□□□ -0.57
FGD4-202ENST00000427716 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.58
FGD4-202ENST00000427716 NEFLP07196 543 aa11.36□□□□□ -0.59
FGD4-202ENST00000427716 ERICH6Q7L0X2 663 aa11.36□□□□□ -0.59
FGD4-202ENST00000427716 CHIC1Q5VXU3 224 aa11.34□□□□□ -0.59
FGD4-202ENST00000427716 TTBK1Q5TCY1 1321 aaPredicted RBP11.31□□□□□ -0.6
FGD4-202ENST00000427716 YTHDC1Q96MU7 727 aaKnown RBP11.24□□□□□ -0.61
FGD4-202ENST00000427716 UBTFP17480 764 aaKnown RBP11.2□□□□□ -0.62
FGD4-202ENST00000427716 NACADO15069 1562 aa11.12□□□□□ -0.63
FGD4-202ENST00000427716 DIEXFQ68CQ4 756 aaKnown RBP11.07□□□□□ -0.64
FGD4-202ENST00000427716 EEA1Q15075 1411 aa11.07□□□□□ -0.64
FGD4-202ENST00000427716 RB1CC1Q8TDY2 1594 aa11.05□□□□□ -0.64
FGD4-202ENST00000427716 SCRIBQ14160 1630 aa11.04□□□□□ -0.64
FGD4-202ENST00000427716 MYT1LQ9UL68 1186 aa11.04□□□□□ -0.64
FGD4-202ENST00000427716 MYO15BQ96JP2 1530 aa11.03□□□□□ -0.64
FGD4-202ENST00000427716 ABCC9O60706 1549 aa11.02□□□□□ -0.65
FGD4-202ENST00000427716 ACIN1Q9UKV3 1341 aaKnown RBP11.01□□□□□ -0.65
FGD4-202ENST00000427716 EHMT2Q96KQ7 1210 aa11.01□□□□□ -0.65
FGD4-202ENST00000427716 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
FGD4-202ENST00000427716 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
FGD4-202ENST00000427716 LOC105371045A0A1W2PR82 267 aa10.9□□□□□ -0.66
FGD4-202ENST00000427716 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
FGD4-202ENST00000427716 RTL5Q5HYW3 569 aaPredicted RBP10.82□□□□□ -0.68
FGD4-202ENST00000427716 GOLGA3Q08378 1498 aa10.81□□□□□ -0.68
FGD4-202ENST00000427716 ANP32CO43423 234 aa10.78□□□□□ -0.68
FGD4-202ENST00000427716 CDK11AQ9UQ88 783 aaPredicted RBP10.77□□□□□ -0.69
FGD4-202ENST00000427716 GTF3C3Q9Y5Q9 886 aa10.77□□□□□ -0.69
FGD4-202ENST00000427716 ATP1B4Q9UN42 357 aaPredicted RBP10.75□□□□□ -0.69
FGD4-202ENST00000427716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.74□□□□□ -0.69
FGD4-202ENST00000427716 PPARGC1BQ86YN6 1023 aaKnown RBP10.74□□□□□ -0.69
FGD4-202ENST00000427716 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
FGD4-202ENST00000427716 CSRNP3Q8WYN3 585 aa10.73□□□□□ -0.69
FGD4-202ENST00000427716 RSF1Q96T23 1441 aaPredicted RBP10.7□□□□□ -0.7
FGD4-202ENST00000427716 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
FGD4-202ENST00000427716 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
FGD4-202ENST00000427716 RANGAP1P46060 587 aaPredicted RBP10.64□□□□□ -0.71
FGD4-202ENST00000427716 TOP2AP11388 1531 aaKnown RBP10.63□□□□□ -0.71
FGD4-202ENST00000427716 CEP162Q5TB80 1403 aa10.62□□□□□ -0.71
FGD4-202ENST00000427716 SMARCA2P51531 1590 aa10.61□□□□□ -0.71
FGD4-202ENST00000427716 ANP32AP39687 249 aaKnown RBP10.61□□□□□ -0.71
FGD4-202ENST00000427716 CLIP1P30622 1438 aa10.61□□□□□ -0.71
FGD4-202ENST00000427716 BAZ1BQ9UIG0 1483 aaKnown RBP10.6□□□□□ -0.71
FGD4-202ENST00000427716 FAM50AQ14320 339 aaKnown RBP10.56□□□□□ -0.72
FGD4-202ENST00000427716 TIMELESSQ9UNS1 1208 aa10.56□□□□□ -0.72
FGD4-202ENST00000427716 TONSLQ96HA7 1378 aa10.55□□□□□ -0.72
FGD4-202ENST00000427716 WRNQ14191 1432 aaPredicted RBP eCLIP10.55□□□□□ -0.72
FGD4-202ENST00000427716 FHAD1B1AJZ9 1412 aa10.53□□□□□ -0.72
FGD4-202ENST00000427716 ITGAEP38570 1179 aa10.51□□□□□ -0.73
FGD4-202ENST00000427716 SMARCA4P51532 1647 aa10.5□□□□□ -0.73
FGD4-202ENST00000427716 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
FGD4-202ENST00000427716 EIF5BO60841 1220 aaKnown RBP10.49□□□□□ -0.73
FGD4-202ENST00000427716 ERICH6BQ5W0A0 696 aa10.49□□□□□ -0.73
FGD4-202ENST00000427716 GLIPR1L2Q4G1C9 344 aa10.48□□□□□ -0.73
FGD4-202ENST00000427716 WIZO95785 1651 aa10.47□□□□□ -0.73
FGD4-202ENST00000427716 KIF21BO75037 1637 aa10.46□□□□□ -0.73
FGD4-202ENST00000427716 SCAF1Q9H7N4 1312 aaKnown RBP10.46□□□□□ -0.74
FGD4-202ENST00000427716 ANP32EQ9BTT0 268 aa10.45□□□□□ -0.74
FGD4-202ENST00000427716 VPS8Q8N3P4 1428 aa10.45□□□□□ -0.74
FGD4-202ENST00000427716 TRIM52Q96A61 297 aa10.43□□□□□ -0.74
FGD4-202ENST00000427716 DDRGK1Q96HY6 314 aa10.42□□□□□ -0.74
FGD4-202ENST00000427716 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.41□□□□□ -0.74
FGD4-202ENST00000427716 NEUROD1Q13562 356 aa10.4□□□□□ -0.74
FGD4-202ENST00000427716 UPF2Q9HAU5 1272 aaKnown RBP10.38□□□□□ -0.75
FGD4-202ENST00000427716 SLC24A1O60721 1099 aa10.37□□□□□ -0.75
FGD4-202ENST00000427716 ANP32BQ92688 251 aaKnown RBP10.37□□□□□ -0.75
FGD4-202ENST00000427716 CCER2I3L3R5 266 aa10.37□□□□□ -0.75
FGD4-202ENST00000427716 MROH2BQ7Z745 1585 aa10.36□□□□□ -0.75
FGD4-202ENST00000427716 ARID4BQ4LE39 1312 aaPredicted RBP10.35□□□□□ -0.75
FGD4-202ENST00000427716 ZBTB47Q9UFB7 747 aaPredicted RBP10.35□□□□□ -0.75
FGD4-202ENST00000427716 FKBP8Q14318 412 aa10.34□□□□□ -0.75
FGD4-202ENST00000427716 ERICH3Q5RHP9 1530 aa10.34□□□□□ -0.75
FGD4-202ENST00000427716 MTUS2Q5JR59 1369 aa10.34□□□□□ -0.75
FGD4-202ENST00000427716 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
FGD4-202ENST00000427716 CCDC88BA6NC98 1476 aa10.33□□□□□ -0.76
FGD4-202ENST00000427716 NEFMP07197 916 aa10.33□□□□□ -0.76
FGD4-202ENST00000427716 POLR3GLQ9BT43 218 aa10.33□□□□□ -0.76
FGD4-202ENST00000427716 ARHGAP35Q9NRY4 1499 aa10.32□□□□□ -0.76
FGD4-202ENST00000427716 EIF4G2P78344 907 aaKnown RBP eCLIP10.29□□□□□ -0.76
FGD4-202ENST00000427716 CUX1P39880 1505 aa10.29□□□□□ -0.76
FGD4-202ENST00000427716 ABCC8Q09428 1581 aa10.29□□□□□ -0.76
FGD4-202ENST00000427716 SETD5Q9C0A6 1442 aa10.28□□□□□ -0.76
FGD4-202ENST00000427716 FMN1Q68DA7 1419 aa10.27□□□□□ -0.76
FGD4-202ENST00000427716 HNRNPUQ00839 825 aaKnown RBP eCLIP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 259.2 ms