Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF6Q9Y252 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF6Q9Y252 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF6Q9Y252 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF6Q9Y252 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF6Q9Y252 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF6Q9Y252 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF6Q9Y252 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF6Q9Y252 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF6Q9Y252 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF6Q9Y252 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF6Q9Y252 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF6Q9Y252 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF6Q9Y252 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
RNF6Q9Y252 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF6Q9Y252 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF6Q9Y252 AL158211.5-201ENST00000623583 2518 ntBASIC18.67■□□□□ 0.58
RNF6Q9Y252 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF6Q9Y252 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF6Q9Y252 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF6Q9Y252 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF6Q9Y252 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF6Q9Y252 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 KRT16P2-201ENST00000414673 1423 ntBASIC18.66■□□□□ 0.58
RNF6Q9Y252 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 RBM17P2-201ENST00000616397 1405 ntBASIC18.66■□□□□ 0.58
RNF6Q9Y252 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 AC093827.2-201ENST00000512654 315 ntBASIC18.66■□□□□ 0.58
RNF6Q9Y252 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.66■□□□□ 0.58
RNF6Q9Y252 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF6Q9Y252 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF6Q9Y252 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF6Q9Y252 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF6Q9Y252 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RNF6Q9Y252 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF6Q9Y252 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF6Q9Y252 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF6Q9Y252 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF6Q9Y252 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF6Q9Y252 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF6Q9Y252 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF6Q9Y252 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF6Q9Y252 AL591742.1-201ENST00000604433 565 ntBASIC18.65■□□□□ 0.58
RNF6Q9Y252 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF6Q9Y252 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF6Q9Y252 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF6Q9Y252 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
RNF6Q9Y252 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.64■□□□□ 0.58
RNF6Q9Y252 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF6Q9Y252 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 AC097658.1-201ENST00000475555 843 ntBASIC18.64■□□□□ 0.57
RNF6Q9Y252 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF6Q9Y252 RARRES2P4-201ENST00000514074 484 ntBASIC18.64■□□□□ 0.57
RNF6Q9Y252 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RNF6Q9Y252 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms