Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.25■□□□□ 0.99
CISHQ9NSE2 AC120498.8-201ENST00000614275 531 ntBASIC21.25■□□□□ 0.99
CISHQ9NSE2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CISHQ9NSE2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CISHQ9NSE2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CISHQ9NSE2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CISHQ9NSE2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CISHQ9NSE2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CISHQ9NSE2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CISHQ9NSE2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CISHQ9NSE2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CISHQ9NSE2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CISHQ9NSE2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.24■□□□□ 0.99
CISHQ9NSE2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.24■□□□□ 0.99
CISHQ9NSE2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CISHQ9NSE2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
CISHQ9NSE2 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.24■□□□□ 0.99
CISHQ9NSE2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.24■□□□□ 0.99
CISHQ9NSE2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CISHQ9NSE2 AC008687.6-201ENST00000596318 630 ntBASIC21.24■□□□□ 0.99
CISHQ9NSE2 AC008403.3-201ENST00000598924 454 ntBASIC21.24■□□□□ 0.99
CISHQ9NSE2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CISHQ9NSE2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CISHQ9NSE2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CISHQ9NSE2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CISHQ9NSE2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CISHQ9NSE2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 PHGDH-210ENST00000641115 1638 ntBASIC21.23■□□□□ 0.99
CISHQ9NSE2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CISHQ9NSE2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.23■□□□□ 0.99
CISHQ9NSE2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.23■□□□□ 0.99
CISHQ9NSE2 RPS2P52-201ENST00000469610 820 ntBASIC21.23■□□□□ 0.99
CISHQ9NSE2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.23■□□□□ 0.99
CISHQ9NSE2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.23■□□□□ 0.99
CISHQ9NSE2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CISHQ9NSE2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CISHQ9NSE2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CISHQ9NSE2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CISHQ9NSE2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CISHQ9NSE2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CISHQ9NSE2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.22■□□□□ 0.99
CISHQ9NSE2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CISHQ9NSE2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CISHQ9NSE2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CISHQ9NSE2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.22■□□□□ 0.99
CISHQ9NSE2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CISHQ9NSE2 AP003097.1-201ENST00000530657 1135 ntBASIC21.22■□□□□ 0.99
CISHQ9NSE2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.22■□□□□ 0.99
CISHQ9NSE2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.22■□□□□ 0.99
CISHQ9NSE2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.22■□□□□ 0.99
CISHQ9NSE2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CISHQ9NSE2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.22■□□□□ 0.99
CISHQ9NSE2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CISHQ9NSE2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CISHQ9NSE2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CISHQ9NSE2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CISHQ9NSE2 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.22■□□□□ 0.99
CISHQ9NSE2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CISHQ9NSE2 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.21■□□□□ 0.99
CISHQ9NSE2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CISHQ9NSE2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CISHQ9NSE2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CISHQ9NSE2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.21■□□□□ 0.99
CISHQ9NSE2 AC026366.1-201ENST00000488803 879 ntBASIC21.21■□□□□ 0.99
CISHQ9NSE2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.21■□□□□ 0.99
CISHQ9NSE2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CISHQ9NSE2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CISHQ9NSE2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.21■□□□□ 0.99
CISHQ9NSE2 MIR4651-201ENST00000582622 73 ntBASIC21.21■□□□□ 0.99
CISHQ9NSE2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.21■□□□□ 0.99
CISHQ9NSE2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.21■□□□□ 0.99
CISHQ9NSE2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.21■□□□□ 0.99
CISHQ9NSE2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CISHQ9NSE2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CISHQ9NSE2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CISHQ9NSE2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.21■□□□□ 0.99
CISHQ9NSE2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CISHQ9NSE2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CISHQ9NSE2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CISHQ9NSE2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CISHQ9NSE2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CISHQ9NSE2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.2■□□□□ 0.98
CISHQ9NSE2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.2■□□□□ 0.98
CISHQ9NSE2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CISHQ9NSE2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.2■□□□□ 0.98
CISHQ9NSE2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.2■□□□□ 0.98
CISHQ9NSE2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.2■□□□□ 0.98
CISHQ9NSE2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CISHQ9NSE2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CISHQ9NSE2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms