Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CYSTM1Q9H1C7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 AC005052.1-201ENST00000625181 2492 ntBASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 AL645608.8-201ENST00000606034 2086 ntBASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CYSTM1Q9H1C7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 AC012317.2-201ENST00000623305 2251 ntBASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CYSTM1Q9H1C7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 AC090877.2-201ENST00000558441 1738 ntBASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 AC073592.3-201ENST00000625118 1834 ntBASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
CYSTM1Q9H1C7 HTR7P1-202ENST00000624664 4411 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms