Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LITAFQ99732 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LITAFQ99732 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LITAFQ99732 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 AK3-203ENST00000447596 705 ntTSL 2 BASIC13.24□□□□□ -0.29
LITAFQ99732 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.24□□□□□ -0.29
LITAFQ99732 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC13.24□□□□□ -0.29
LITAFQ99732 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.24□□□□□ -0.29
LITAFQ99732 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.24□□□□□ -0.29
LITAFQ99732 AC133561.4-201ENST00000566112 224 ntBASIC13.24□□□□□ -0.29
LITAFQ99732 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC13.24□□□□□ -0.29
LITAFQ99732 AL138724.1-201ENST00000606771 1088 ntBASIC13.24□□□□□ -0.29
LITAFQ99732 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.24□□□□□ -0.29
LITAFQ99732 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.24□□□□□ -0.29
LITAFQ99732 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.24□□□□□ -0.29
LITAFQ99732 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.24□□□□□ -0.29
LITAFQ99732 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.24□□□□□ -0.29
LITAFQ99732 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 MFF-207ENST00000409565 1548 ntTSL 2 BASIC13.23□□□□□ -0.29
LITAFQ99732 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.23□□□□□ -0.29
LITAFQ99732 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.23□□□□□ -0.29
LITAFQ99732 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.23□□□□□ -0.29
LITAFQ99732 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.23□□□□□ -0.29
LITAFQ99732 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.23□□□□□ -0.29
LITAFQ99732 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.23□□□□□ -0.29
LITAFQ99732 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.23□□□□□ -0.29
LITAFQ99732 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LITAFQ99732 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC13.23□□□□□ -0.29
LITAFQ99732 AC136469.2-201ENST00000623944 1028 ntBASIC13.23□□□□□ -0.29
LITAFQ99732 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LITAFQ99732 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.23□□□□□ -0.29
LITAFQ99732 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LITAFQ99732 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LITAFQ99732 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC13.22□□□□□ -0.29
LITAFQ99732 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
LITAFQ99732 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LITAFQ99732 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.22□□□□□ -0.29
LITAFQ99732 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.22□□□□□ -0.29
LITAFQ99732 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LITAFQ99732 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.22□□□□□ -0.29
LITAFQ99732 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms