Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP4Q99569 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP4Q99569 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.37■□□□□ 0.69
PKP4Q99569 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP4Q99569 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP4Q99569 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PKP4Q99569 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
PKP4Q99569 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP4Q99569 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PKP4Q99569 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
PKP4Q99569 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PKP4Q99569 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.37■□□□□ 0.69
PKP4Q99569 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.37■□□□□ 0.69
PKP4Q99569 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PKP4Q99569 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.37■□□□□ 0.69
PKP4Q99569 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.37■□□□□ 0.69
PKP4Q99569 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PKP4Q99569 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PKP4Q99569 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP4Q99569 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PKP4Q99569 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.37■□□□□ 0.69
PKP4Q99569 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP4Q99569 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.37■□□□□ 0.69
PKP4Q99569 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PKP4Q99569 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PKP4Q99569 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP4Q99569 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP4Q99569 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP4Q99569 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP4Q99569 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PKP4Q99569 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP4Q99569 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.36■□□□□ 0.69
PKP4Q99569 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.36■□□□□ 0.69
PKP4Q99569 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.36■□□□□ 0.69
PKP4Q99569 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PKP4Q99569 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.36■□□□□ 0.69
PKP4Q99569 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PKP4Q99569 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.36■□□□□ 0.69
PKP4Q99569 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP4Q99569 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP4Q99569 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP4Q99569 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP4Q99569 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PKP4Q99569 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PKP4Q99569 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.36■□□□□ 0.69
PKP4Q99569 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.36■□□□□ 0.69
PKP4Q99569 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.35■□□□□ 0.69
PKP4Q99569 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.35■□□□□ 0.69
PKP4Q99569 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.35■□□□□ 0.69
PKP4Q99569 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.35■□□□□ 0.69
PKP4Q99569 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.35■□□□□ 0.69
PKP4Q99569 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PKP4Q99569 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PKP4Q99569 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PKP4Q99569 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PKP4Q99569 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PKP4Q99569 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.34■□□□□ 0.69
PKP4Q99569 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.34■□□□□ 0.69
PKP4Q99569 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.34■□□□□ 0.69
PKP4Q99569 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.34■□□□□ 0.69
PKP4Q99569 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.34■□□□□ 0.69
PKP4Q99569 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.34■□□□□ 0.69
PKP4Q99569 RNA5SP413-201ENST00000516373 109 ntBASIC19.34■□□□□ 0.69
PKP4Q99569 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.34■□□□□ 0.69
PKP4Q99569 KRT18P6-201ENST00000555540 1265 ntBASIC19.34■□□□□ 0.69
PKP4Q99569 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PKP4Q99569 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.34■□□□□ 0.69
PKP4Q99569 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.34■□□□□ 0.69
PKP4Q99569 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PKP4Q99569 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.34■□□□□ 0.69
PKP4Q99569 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.34■□□□□ 0.69
PKP4Q99569 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.34■□□□□ 0.69
PKP4Q99569 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.34■□□□□ 0.69
PKP4Q99569 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PKP4Q99569 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PKP4Q99569 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PKP4Q99569 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
PKP4Q99569 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PKP4Q99569 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PKP4Q99569 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PKP4Q99569 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
PKP4Q99569 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PKP4Q99569 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PKP4Q99569 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.33■□□□□ 0.68
PKP4Q99569 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PKP4Q99569 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.33■□□□□ 0.68
PKP4Q99569 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PKP4Q99569 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms