Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 AL445675.2-201ENST00000620291 557 ntBASIC17.56■□□□□ 0.4
PCNX1Q96RV3 AL590326.2-201ENST00000625139 305 ntBASIC17.56■□□□□ 0.4
PCNX1Q96RV3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 AC244015.2-201ENST00000616358 1861 ntBASIC17.56■□□□□ 0.4
PCNX1Q96RV3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.56■□□□□ 0.4
PCNX1Q96RV3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 AL117328.2-201ENST00000624617 1940 ntBASIC17.55■□□□□ 0.4
PCNX1Q96RV3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 TPM4P1-201ENST00000436100 807 ntBASIC17.55■□□□□ 0.4
PCNX1Q96RV3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNX1Q96RV3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 AC005363.2-201ENST00000618631 242 ntBASIC17.54■□□□□ 0.4
PCNX1Q96RV3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 AC005229.4-201ENST00000610085 2198 ntBASIC17.54■□□□□ 0.4
PCNX1Q96RV3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 FEM1AP4-201ENST00000443167 1987 ntBASIC17.54■□□□□ 0.4
PCNX1Q96RV3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNX1Q96RV3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 ECEL1P2-202ENST00000465689 757 ntBASIC17.53■□□□□ 0.4
PCNX1Q96RV3 AC097488.1-201ENST00000507834 756 ntBASIC17.53■□□□□ 0.4
PCNX1Q96RV3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNX1Q96RV3 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms