Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 AP002982.1-201ENST00000492365 877 ntBASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 AP000525.1-201ENST00000608286 694 ntBASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 KRT8P9-201ENST00000558927 1449 ntBASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 AC027702.1-201ENST00000563810 1770 ntBASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC46A1Q96NT5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC46A1Q96NT5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 MIR1238-201ENST00000408483 83 ntBASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 AL031963.3-201ENST00000606441 850 ntBASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 LINC01568-207ENST00000641790 1380 ntBASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC46A1Q96NT5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 AC113347.1-201ENST00000413321 391 ntBASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC46A1Q96NT5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC46A1Q96NT5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC46A1Q96NT5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms