Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC142381.4-202ENST00000563973 229 ntBASIC19.78■□□□□ 0.76
SCAMP4Q969E2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 AL023875.1-201ENST00000640777 796 ntBASIC19.78■□□□□ 0.76
SCAMP4Q969E2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SCAMP4Q969E2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 AC099778.1-201ENST00000568593 1911 ntBASIC19.77■□□□□ 0.76
SCAMP4Q969E2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 RPPH1-201ENST00000516869 333 ntBASIC19.77■□□□□ 0.76
SCAMP4Q969E2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 AC112907.3-201ENST00000577781 2400 ntBASIC19.77■□□□□ 0.76
SCAMP4Q969E2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.77■□□□□ 0.76
SCAMP4Q969E2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SCAMP4Q969E2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.77■□□□□ 0.75
SCAMP4Q969E2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SCAMP4Q969E2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SCAMP4Q969E2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SCAMP4Q969E2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 AL121829.2-201ENST00000620908 328 ntBASIC19.76■□□□□ 0.75
SCAMP4Q969E2 AL359736.2-201ENST00000621992 437 ntBASIC19.76■□□□□ 0.75
SCAMP4Q969E2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 LINC01521-201ENST00000504184 1943 ntBASIC19.76■□□□□ 0.75
SCAMP4Q969E2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
SCAMP4Q969E2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 AL691432.2-201ENST00000607222 2038 ntBASIC19.75■□□□□ 0.75
SCAMP4Q969E2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SCAMP4Q969E2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms