Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 AL353803.4-201ENST00000565882 1934 ntBASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 AC087742.1-201ENST00000575880 1738 ntBASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 AC144652.1-201ENST00000609974 1624 ntBASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 DUX4L13-201ENST00000554103 1267 ntBASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 DUX4L15-201ENST00000611059 1267 ntBASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 MED25-210ENST00000612854 801 ntTSL 5 BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 DUX4L23-201ENST00000615195 1269 ntBASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 DUX4L24-201ENST00000617576 1269 ntBASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 DUX4L22-201ENST00000618238 1269 ntBASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 DUX4L20-201ENST00000619712 1269 ntBASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 DUX4L21-201ENST00000622058 1269 ntBASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 MED25-214ENST00000622402 642 ntTSL 5 BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 DUX4L10-201ENST00000622460 1267 ntBASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 DUX4L25-201ENST00000624915 1269 ntBASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SPTSSBQ8NFR3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 REST-210ENST00000638187 1334 ntTSL 5 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 AP006261.1-201ENST00000584783 668 ntBASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 LINC01971-201ENST00000617888 1048 ntBASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms