Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 HLA-B-256ENST00000639848 1089 ntBASIC17.4■□□□□ 0.38
CPEB3Q8NE35 TCF3P1-201ENST00000423021 1937 ntBASIC17.4■□□□□ 0.38
CPEB3Q8NE35 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPEB3Q8NE35 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPEB3Q8NE35 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
CPEB3Q8NE35 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 AC005829.2-201ENST00000571422 1056 ntBASIC17.39■□□□□ 0.37
CPEB3Q8NE35 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 AC092368.3-202ENST00000574180 1591 ntBASIC17.39■□□□□ 0.37
CPEB3Q8NE35 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPEB3Q8NE35 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 AC060766.5-201ENST00000590539 871 ntBASIC17.38■□□□□ 0.37
CPEB3Q8NE35 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPEB3Q8NE35 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 PNMA6B-201ENST00000538162 1200 ntBASIC17.37■□□□□ 0.37
CPEB3Q8NE35 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 KRT16P6-202ENST00000425692 1426 ntBASIC17.37■□□□□ 0.37
CPEB3Q8NE35 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms