Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 AL133373.2-201ENST00000623187 2828 ntBASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 MIR6724-1-201ENST00000616420 92 ntBASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 MIR6724-2-201ENST00000616483 92 ntBASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 MIR6724-4-201ENST00000617390 92 ntBASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 MIR6724-3-201ENST00000622482 92 ntBASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC197Q8NCU1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC197Q8NCU1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 AP000997.3-201ENST00000623333 2250 ntBASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC197Q8NCU1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 SLC47A1P1-202ENST00000449666 945 ntBASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 AC092171.4-201ENST00000609130 632 ntBASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC197Q8NCU1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms