Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 AL445675.2-201ENST00000620291 557 ntBASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 DGCR10-201ENST00000609839 495 ntBASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC27.72■■■□□ 2.03
ARHGEF28Q8N1W1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 PPP1R14BP5-201ENST00000440334 435 ntBASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 CR392000.1-201ENST00000624770 1228 ntBASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 CYP2D8P-201ENST00000433633 1490 ntBASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
ARHGEF28Q8N1W1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC27.7■■■□□ 2.03
ARHGEF28Q8N1W1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
ARHGEF28Q8N1W1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
ARHGEF28Q8N1W1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
ARHGEF28Q8N1W1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC27.7■■■□□ 2.03
ARHGEF28Q8N1W1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.03
ARHGEF28Q8N1W1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC27.7■■■□□ 2.03
ARHGEF28Q8N1W1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
ARHGEF28Q8N1W1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC27.7■■■□□ 2.03
ARHGEF28Q8N1W1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
ARHGEF28Q8N1W1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC27.7■■■□□ 2.02
ARHGEF28Q8N1W1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ARHGEF28Q8N1W1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC27.7■■■□□ 2.02
ARHGEF28Q8N1W1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
ARHGEF28Q8N1W1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC27.7■■■□□ 2.02
ARHGEF28Q8N1W1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC27.7■■■□□ 2.02
ARHGEF28Q8N1W1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 MIR1238-201ENST00000408483 83 ntBASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 B3GAT3P1-201ENST00000471720 806 ntBASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 AC010947.1-201ENST00000623454 693 ntBASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
ARHGEF28Q8N1W1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 FITM1-202ENST00000559294 800 ntBASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 AL031985.4-201ENST00000642138 673 ntBASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ARHGEF28Q8N1W1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 TMPOP1-202ENST00000424642 1267 ntBASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 TK2-213ENST00000563369 882 ntTSL 5 BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC27.67■■■□□ 2.02
ARHGEF28Q8N1W1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms