Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX60Q8IY21 AC018553.1-201ENST00000616682 1458 ntBASIC24.69■■□□□ 1.54
DDX60Q8IY21 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX60Q8IY21 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX60Q8IY21 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX60Q8IY21 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX60Q8IY21 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
DDX60Q8IY21 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX60Q8IY21 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.69■■□□□ 1.54
DDX60Q8IY21 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX60Q8IY21 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX60Q8IY21 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24.69■■□□□ 1.54
DDX60Q8IY21 MESTP1-201ENST00000404287 994 ntBASIC24.69■■□□□ 1.54
DDX60Q8IY21 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
DDX60Q8IY21 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.68■■□□□ 1.54
DDX60Q8IY21 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX60Q8IY21 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.68■■□□□ 1.54
DDX60Q8IY21 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX60Q8IY21 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC24.68■■□□□ 1.54
DDX60Q8IY21 PHGDH-210ENST00000641115 1638 ntBASIC24.68■■□□□ 1.54
DDX60Q8IY21 TFP1-202ENST00000475455 1573 ntBASIC24.68■■□□□ 1.54
DDX60Q8IY21 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.68■■□□□ 1.54
DDX60Q8IY21 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
DDX60Q8IY21 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
DDX60Q8IY21 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
DDX60Q8IY21 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
DDX60Q8IY21 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.68■■□□□ 1.54
DDX60Q8IY21 GLDC-219ENST00000640208 420 ntTSL 2 BASIC24.68■■□□□ 1.54
DDX60Q8IY21 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.68■■□□□ 1.54
DDX60Q8IY21 CYP2D8P-201ENST00000433633 1490 ntBASIC24.67■■□□□ 1.54
DDX60Q8IY21 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX60Q8IY21 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX60Q8IY21 AC113347.1-201ENST00000413321 391 ntBASIC24.67■■□□□ 1.54
DDX60Q8IY21 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.67■■□□□ 1.54
DDX60Q8IY21 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DDX60Q8IY21 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.67■■□□□ 1.54
DDX60Q8IY21 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX60Q8IY21 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX60Q8IY21 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DDX60Q8IY21 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 CR392000.1-201ENST00000624770 1228 ntBASIC24.66■■□□□ 1.54
DDX60Q8IY21 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX60Q8IY21 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX60Q8IY21 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 AC092720.2-201ENST00000602388 1665 ntBASIC24.66■■□□□ 1.54
DDX60Q8IY21 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX60Q8IY21 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 TMPOP1-202ENST00000424642 1267 ntBASIC24.66■■□□□ 1.54
DDX60Q8IY21 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.66■■□□□ 1.54
DDX60Q8IY21 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX60Q8IY21 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.65■■□□□ 1.54
DDX60Q8IY21 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX60Q8IY21 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.65■■□□□ 1.54
DDX60Q8IY21 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX60Q8IY21 CRAT-202ENST00000393384 973 ntTSL 2 BASIC24.65■■□□□ 1.54
DDX60Q8IY21 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.65■■□□□ 1.54
DDX60Q8IY21 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.65■■□□□ 1.54
DDX60Q8IY21 TK2-213ENST00000563369 882 ntTSL 5 BASIC24.65■■□□□ 1.54
DDX60Q8IY21 AL445228.2-201ENST00000605589 952 ntBASIC24.65■■□□□ 1.54
DDX60Q8IY21 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX60Q8IY21 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
DDX60Q8IY21 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
DDX60Q8IY21 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.65■■□□□ 1.54
DDX60Q8IY21 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
DDX60Q8IY21 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX60Q8IY21 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX60Q8IY21 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
DDX60Q8IY21 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.65■■□□□ 1.54
DDX60Q8IY21 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
DDX60Q8IY21 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
DDX60Q8IY21 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
DDX60Q8IY21 MIR1238-201ENST00000408483 83 ntBASIC24.64■■□□□ 1.54
DDX60Q8IY21 KRT18P16-201ENST00000510337 1294 ntBASIC24.64■■□□□ 1.54
DDX60Q8IY21 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
DDX60Q8IY21 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.64■■□□□ 1.54
DDX60Q8IY21 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC24.64■■□□□ 1.54
DDX60Q8IY21 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
DDX60Q8IY21 AC010947.1-201ENST00000623454 693 ntBASIC24.64■■□□□ 1.54
DDX60Q8IY21 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
DDX60Q8IY21 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
DDX60Q8IY21 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
DDX60Q8IY21 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.64■■□□□ 1.54
DDX60Q8IY21 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.64■■□□□ 1.54
DDX60Q8IY21 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.64■■□□□ 1.53
DDX60Q8IY21 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.64■■□□□ 1.53
DDX60Q8IY21 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
DDX60Q8IY21 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.64■■□□□ 1.53
DDX60Q8IY21 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
DDX60Q8IY21 AP006587.1-201ENST00000534129 1502 ntBASIC24.64■■□□□ 1.53
DDX60Q8IY21 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms