Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 PRKY-204ENST00000533551 1019 ntBASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM48Q8IWZ4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 AC239809.2-201ENST00000415381 517 ntBASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM48Q8IWZ4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 UBE2SP1-201ENST00000450587 669 ntBASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 MTDHP1-201ENST00000605323 784 ntBASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM48Q8IWZ4 PTBP1P-201ENST00000554374 1601 ntBASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 AL023875.1-201ENST00000640777 796 ntBASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 KRT8P17-201ENST00000453110 1448 ntBASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM48Q8IWZ4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms