Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC117947.1-201ENST00000427448 529 ntBASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 AC010203.1-204ENST00000548782 407 ntBASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 AK4P3-201ENST00000418260 669 ntBASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13BQ7Z7G8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 Z98882.1-201ENST00000622160 2253 ntBASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 ATP5G1P1-201ENST00000448724 379 ntBASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.34□□□□□ -0.43
VPS13BQ7Z7G8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 SLC25A1P4-201ENST00000567977 778 ntBASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 AL031985.4-201ENST00000642138 673 ntBASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 AL450487.1-201ENST00000426799 995 ntBASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 CR392000.1-201ENST00000624770 1228 ntBASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13BQ7Z7G8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 AC130371.2-201ENST00000619443 611 ntBASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms