Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 AP002982.1-201ENST00000492365 877 ntBASIC13.91□□□□□ -0.18
CSMD3Q7Z407 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 MFF-203ENST00000349901 1716 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 AC133561.1-201ENST00000568600 2415 ntBASIC13.91□□□□□ -0.18
CSMD3Q7Z407 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD3Q7Z407 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 C2orf69P3-201ENST00000565542 1120 ntBASIC13.9□□□□□ -0.18
CSMD3Q7Z407 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.9□□□□□ -0.18
CSMD3Q7Z407 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.9□□□□□ -0.19
CSMD3Q7Z407 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 AC097488.1-201ENST00000507834 756 ntBASIC13.89□□□□□ -0.19
CSMD3Q7Z407 EGLN1P1-201ENST00000531623 762 ntBASIC13.89□□□□□ -0.19
CSMD3Q7Z407 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 AC004263.2-201ENST00000617183 678 ntBASIC13.89□□□□□ -0.19
CSMD3Q7Z407 AC011558.1-201ENST00000623459 338 ntBASIC13.89□□□□□ -0.19
CSMD3Q7Z407 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 AL390719.1-204ENST00000412397 1219 ntBASIC13.89□□□□□ -0.19
CSMD3Q7Z407 HMGA1P5-201ENST00000412453 271 ntBASIC13.89□□□□□ -0.19
CSMD3Q7Z407 AL121956.5-201ENST00000625261 221 ntBASIC13.89□□□□□ -0.19
CSMD3Q7Z407 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD3Q7Z407 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD3Q7Z407 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms