Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19■□□□□ 0.63
PPP4R4Q6NUP7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 AP001160.3-201ENST00000601484 763 ntBASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.99■□□□□ 0.63
PPP4R4Q6NUP7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 AC093484.2-201ENST00000580996 2166 ntBASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.98■□□□□ 0.63
PPP4R4Q6NUP7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 AC026471.1-201ENST00000564629 3026 ntBASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PPP4R4Q6NUP7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PPP4R4Q6NUP7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms