Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 AC140113.3-201ENST00000605663 199 ntBASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 AC011298.2-201ENST00000617989 482 ntBASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 MIR2861-201ENST00000636310 90 ntBASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTCRAQ6ISU1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 KRT8P20-201ENST00000423953 1409 ntBASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PTCRAQ6ISU1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 RCC2P6-201ENST00000526625 1557 ntBASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 VENTXP5-201ENST00000523979 775 ntBASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCRAQ6ISU1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTCRAQ6ISU1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PTCRAQ6ISU1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCRAQ6ISU1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCRAQ6ISU1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.58■□□□□ 0.89
PTCRAQ6ISU1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.58■□□□□ 0.89
PTCRAQ6ISU1 AL512604.3-201ENST00000569583 964 ntBASIC20.58■□□□□ 0.89
PTCRAQ6ISU1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCRAQ6ISU1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.58■□□□□ 0.88
PTCRAQ6ISU1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTCRAQ6ISU1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTCRAQ6ISU1 AC096733.2-201ENST00000609937 1394 ntBASIC20.58■□□□□ 0.88
PTCRAQ6ISU1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
PTCRAQ6ISU1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 PTBP1P-201ENST00000554374 1601 ntBASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 AC092338.2-201ENST00000568827 1415 ntBASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 GPALPP1-207ENST00000611650 899 ntBASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PTCRAQ6ISU1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 AC004951.3-201ENST00000418645 1148 ntBASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 AC008040.2-201ENST00000461049 708 ntBASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 AL441883.1-201ENST00000566170 1045 ntBASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 AL023973.1-201ENST00000624619 620 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms