Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 CDV3P1-201ENST00000471403 739 ntBASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00242Q5T6M2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00242Q5T6M2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00242Q5T6M2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.58□□□□□ -0.23
LINC00242Q5T6M2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
LINC00242Q5T6M2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.58□□□□□ -0.23
LINC00242Q5T6M2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00242Q5T6M2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 AL032819.2-201ENST00000624543 2162 ntBASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 AC097381.1-201ENST00000429019 1296 ntBASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 SLC7A5P1-201ENST00000568957 537 ntBASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 AL356652.1-201ENST00000615962 565 ntBASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 AC110285.6-201ENST00000617652 491 ntBASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00242Q5T6M2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms