Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
RUNDC3AQ59EK9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
RUNDC3AQ59EK9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RUNDC3AQ59EK9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.77■□□□□ 0.59
RUNDC3AQ59EK9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RUNDC3AQ59EK9 AC004408.2-201ENST00000623613 2777 ntBASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RUNDC3AQ59EK9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 KRT16P6-202ENST00000425692 1426 ntBASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 AL031963.3-201ENST00000606441 850 ntBASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.75■□□□□ 0.59
RUNDC3AQ59EK9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 AC007322.4-201ENST00000509611 723 ntBASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RUNDC3AQ59EK9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms