Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 KRT8P17-201ENST00000453110 1448 ntBASIC19.08■□□□□ 0.65
PDCD4Q53EL6 TNXA-203ENST00000507684 2038 ntBASIC19.08■□□□□ 0.65
PDCD4Q53EL6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDCD4Q53EL6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
PDCD4Q53EL6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDCD4Q53EL6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDCD4Q53EL6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.08■□□□□ 0.65
PDCD4Q53EL6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDCD4Q53EL6 Z82202.1-201ENST00000623446 1880 ntBASIC19.08■□□□□ 0.65
PDCD4Q53EL6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PDCD4Q53EL6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDCD4Q53EL6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.08■□□□□ 0.64
PDCD4Q53EL6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.08■□□□□ 0.64
PDCD4Q53EL6 AL162412.1-201ENST00000567129 965 ntBASIC19.08■□□□□ 0.64
PDCD4Q53EL6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.08■□□□□ 0.64
PDCD4Q53EL6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDCD4Q53EL6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDCD4Q53EL6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.08■□□□□ 0.64
PDCD4Q53EL6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.08■□□□□ 0.64
PDCD4Q53EL6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.08■□□□□ 0.64
PDCD4Q53EL6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.07■□□□□ 0.64
PDCD4Q53EL6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 AC010536.3-201ENST00000620306 533 ntBASIC19.07■□□□□ 0.64
PDCD4Q53EL6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PDCD4Q53EL6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDCD4Q53EL6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 AC007322.4-201ENST00000509611 723 ntBASIC19.05■□□□□ 0.64
PDCD4Q53EL6 AL031963.3-201ENST00000606441 850 ntBASIC19.05■□□□□ 0.64
PDCD4Q53EL6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 KRT16P6-202ENST00000425692 1426 ntBASIC19.05■□□□□ 0.64
PDCD4Q53EL6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDCD4Q53EL6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms