Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFNB3Q15768 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EFNB3Q15768 KRT16P6-202ENST00000425692 1426 ntBASIC16.98■□□□□ 0.31
EFNB3Q15768 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.98■□□□□ 0.31
EFNB3Q15768 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFNB3Q15768 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EFNB3Q15768 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFNB3Q15768 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.98■□□□□ 0.31
EFNB3Q15768 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.98■□□□□ 0.31
EFNB3Q15768 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
EFNB3Q15768 KRT16P5-201ENST00000455284 522 ntBASIC16.98■□□□□ 0.31
EFNB3Q15768 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.98■□□□□ 0.31
EFNB3Q15768 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.98■□□□□ 0.31
EFNB3Q15768 MIR4497-201ENST00000583208 89 ntBASIC16.98■□□□□ 0.31
EFNB3Q15768 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.98■□□□□ 0.31
EFNB3Q15768 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.98■□□□□ 0.31
EFNB3Q15768 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.98■□□□□ 0.31
EFNB3Q15768 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.98■□□□□ 0.31
EFNB3Q15768 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFNB3Q15768 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFNB3Q15768 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.98■□□□□ 0.31
EFNB3Q15768 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFNB3Q15768 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.97■□□□□ 0.31
EFNB3Q15768 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
EFNB3Q15768 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.97■□□□□ 0.31
EFNB3Q15768 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
EFNB3Q15768 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
EFNB3Q15768 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
EFNB3Q15768 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.97■□□□□ 0.31
EFNB3Q15768 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.97■□□□□ 0.31
EFNB3Q15768 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
EFNB3Q15768 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
EFNB3Q15768 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.97■□□□□ 0.31
EFNB3Q15768 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
EFNB3Q15768 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
EFNB3Q15768 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
EFNB3Q15768 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFNB3Q15768 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.96■□□□□ 0.31
EFNB3Q15768 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
EFNB3Q15768 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
EFNB3Q15768 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
EFNB3Q15768 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
EFNB3Q15768 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
EFNB3Q15768 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 AC004264.1-201ENST00000608354 794 ntBASIC16.96■□□□□ 0.31
EFNB3Q15768 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.96■□□□□ 0.31
EFNB3Q15768 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.96■□□□□ 0.31
EFNB3Q15768 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EFNB3Q15768 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.96■□□□□ 0.31
EFNB3Q15768 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
EFNB3Q15768 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
EFNB3Q15768 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.96■□□□□ 0.3
EFNB3Q15768 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
EFNB3Q15768 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.96■□□□□ 0.3
EFNB3Q15768 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.95■□□□□ 0.3
EFNB3Q15768 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.95■□□□□ 0.3
EFNB3Q15768 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.95■□□□□ 0.3
EFNB3Q15768 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.95■□□□□ 0.3
EFNB3Q15768 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.95■□□□□ 0.3
EFNB3Q15768 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
EFNB3Q15768 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.95■□□□□ 0.3
EFNB3Q15768 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.95■□□□□ 0.3
EFNB3Q15768 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
EFNB3Q15768 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms