Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2AP49459 AC091799.1-201ENST00000422823 811 ntBASIC12.6□□□□□ -0.39
UBE2AP49459 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC12.6□□□□□ -0.39
UBE2AP49459 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2AP49459 CD44-222ENST00000526025 1052 ntTSL 2 BASIC12.6□□□□□ -0.39
UBE2AP49459 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC12.6□□□□□ -0.39
UBE2AP49459 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
UBE2AP49459 MIR6821-201ENST00000617625 74 ntBASIC12.6□□□□□ -0.39
UBE2AP49459 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
UBE2AP49459 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2AP49459 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2AP49459 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2AP49459 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2AP49459 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2AP49459 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.59□□□□□ -0.39
UBE2AP49459 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UBE2AP49459 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UBE2AP49459 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
UBE2AP49459 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2AP49459 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2AP49459 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2AP49459 BRI3-207ENST00000539286 699 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2AP49459 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UBE2AP49459 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
UBE2AP49459 AC087623.3-201ENST00000607047 1098 ntBASIC12.59□□□□□ -0.39
UBE2AP49459 MIR2861-201ENST00000636310 90 ntBASIC12.59□□□□□ -0.39
UBE2AP49459 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
UBE2AP49459 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC12.59□□□□□ -0.39
UBE2AP49459 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC12.59□□□□□ -0.39
UBE2AP49459 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UBE2AP49459 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2AP49459 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
UBE2AP49459 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
UBE2AP49459 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC12.58□□□□□ -0.39
UBE2AP49459 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
UBE2AP49459 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
UBE2AP49459 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
UBE2AP49459 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
UBE2AP49459 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
UBE2AP49459 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2AP49459 TERF1P5-201ENST00000477545 1207 ntBASIC12.58□□□□□ -0.4
UBE2AP49459 PBX1-209ENST00000485769 834 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC12.58□□□□□ -0.4
UBE2AP49459 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC12.58□□□□□ -0.4
UBE2AP49459 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 AL591742.1-201ENST00000604433 565 ntBASIC12.58□□□□□ -0.4
UBE2AP49459 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2AP49459 AC010536.3-201ENST00000620306 533 ntBASIC12.58□□□□□ -0.4
UBE2AP49459 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2AP49459 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
UBE2AP49459 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2AP49459 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2AP49459 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2AP49459 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
UBE2AP49459 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2AP49459 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2AP49459 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2AP49459 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2AP49459 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2AP49459 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2AP49459 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.57□□□□□ -0.4
UBE2AP49459 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2AP49459 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms