Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCP4P48539 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PCP4P48539 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCP4P48539 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCP4P48539 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PCP4P48539 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCP4P48539 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.82□□□□□ -0.2
PCP4P48539 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCP4P48539 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCP4P48539 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
PCP4P48539 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.82□□□□□ -0.2
PCP4P48539 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCP4P48539 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.82□□□□□ -0.2
PCP4P48539 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCP4P48539 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PCP4P48539 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCP4P48539 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCP4P48539 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PCP4P48539 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PCP4P48539 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.82□□□□□ -0.2
PCP4P48539 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCP4P48539 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PCP4P48539 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
PCP4P48539 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PCP4P48539 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
PCP4P48539 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCP4P48539 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
PCP4P48539 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.81□□□□□ -0.2
PCP4P48539 AL365209.1-201ENST00000624418 6473 ntBASIC13.81□□□□□ -0.2
PCP4P48539 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.81□□□□□ -0.2
PCP4P48539 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.81□□□□□ -0.2
PCP4P48539 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.81□□□□□ -0.2
PCP4P48539 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.81□□□□□ -0.2
PCP4P48539 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.81□□□□□ -0.2
PCP4P48539 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.81□□□□□ -0.2
PCP4P48539 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCP4P48539 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 AC008741.2-201ENST00000612792 3115 ntBASIC13.81□□□□□ -0.2
PCP4P48539 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCP4P48539 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCP4P48539 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.8□□□□□ -0.2
PCP4P48539 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PCP4P48539 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.8□□□□□ -0.2
PCP4P48539 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
PCP4P48539 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 PCDHB17P-201ENST00000539533 2393 ntBASIC13.8□□□□□ -0.2
PCP4P48539 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PCP4P48539 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.8□□□□□ -0.2
PCP4P48539 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PCP4P48539 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 Z98882.1-201ENST00000622160 2253 ntBASIC13.8□□□□□ -0.2
PCP4P48539 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCP4P48539 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.8□□□□□ -0.2
PCP4P48539 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PCP4P48539 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PCP4P48539 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PCP4P48539 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCP4P48539 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCP4P48539 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCP4P48539 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCP4P48539 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCP4P48539 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCP4P48539 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
PCP4P48539 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCP4P48539 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.79□□□□□ -0.2
PCP4P48539 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCP4P48539 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms