Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCL5P42830 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCL5P42830 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCL5P42830 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CXCL5P42830 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.39□□□□□ -0.27
CXCL5P42830 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CXCL5P42830 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCL5P42830 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCL5P42830 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 BX119927.1-201ENST00000636596 1552 ntBASIC13.38□□□□□ -0.27
CXCL5P42830 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CXCL5P42830 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.38□□□□□ -0.27
CXCL5P42830 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCL5P42830 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.38□□□□□ -0.27
CXCL5P42830 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CXCL5P42830 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCL5P42830 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.38□□□□□ -0.27
CXCL5P42830 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.38□□□□□ -0.27
CXCL5P42830 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CXCL5P42830 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.38□□□□□ -0.27
CXCL5P42830 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
CXCL5P42830 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.38□□□□□ -0.27
CXCL5P42830 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CXCL5P42830 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.38□□□□□ -0.27
CXCL5P42830 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.37□□□□□ -0.27
CXCL5P42830 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.37□□□□□ -0.27
CXCL5P42830 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CXCL5P42830 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CXCL5P42830 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
CXCL5P42830 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.37□□□□□ -0.27
CXCL5P42830 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 AC008406.3-201ENST00000620001 1374 ntBASIC13.37□□□□□ -0.27
CXCL5P42830 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCL5P42830 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.37□□□□□ -0.27
CXCL5P42830 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.37□□□□□ -0.27
CXCL5P42830 AC105265.2-201ENST00000467189 838 ntBASIC13.37□□□□□ -0.27
CXCL5P42830 CDV3P1-201ENST00000471403 739 ntBASIC13.37□□□□□ -0.27
CXCL5P42830 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCL5P42830 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCL5P42830 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.37□□□□□ -0.27
CXCL5P42830 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCL5P42830 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.37□□□□□ -0.27
CXCL5P42830 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CXCL5P42830 AC116562.4-201ENST00000641316 2276 ntBASIC13.37□□□□□ -0.27
CXCL5P42830 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCL5P42830 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCL5P42830 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
CXCL5P42830 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
CXCL5P42830 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
CXCL5P42830 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.36□□□□□ -0.27
CXCL5P42830 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.36□□□□□ -0.27
CXCL5P42830 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
CXCL5P42830 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.36□□□□□ -0.27
CXCL5P42830 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.36□□□□□ -0.27
CXCL5P42830 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.36□□□□□ -0.27
CXCL5P42830 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms