Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCND1P24385 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCND1P24385 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCND1P24385 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCND1P24385 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCND1P24385 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCND1P24385 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.96■□□□□ 0.79
CCND1P24385 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.96■□□□□ 0.79
CCND1P24385 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCND1P24385 AL591742.1-201ENST00000604433 565 ntBASIC19.96■□□□□ 0.79
CCND1P24385 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.96■□□□□ 0.79
CCND1P24385 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCND1P24385 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCND1P24385 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCND1P24385 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCND1P24385 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCND1P24385 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCND1P24385 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CCND1P24385 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
CCND1P24385 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CCND1P24385 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 AL158211.5-201ENST00000623583 2518 ntBASIC19.95■□□□□ 0.78
CCND1P24385 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.95■□□□□ 0.78
CCND1P24385 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
CCND1P24385 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCND1P24385 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.95■□□□□ 0.78
CCND1P24385 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.95■□□□□ 0.78
CCND1P24385 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.95■□□□□ 0.78
CCND1P24385 TCF3P1-201ENST00000423021 1937 ntBASIC19.95■□□□□ 0.78
CCND1P24385 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.95■□□□□ 0.78
CCND1P24385 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCND1P24385 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CCND1P24385 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCND1P24385 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.94■□□□□ 0.78
CCND1P24385 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 DUX4L16-201ENST00000555130 1264 ntBASIC19.94■□□□□ 0.78
CCND1P24385 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.94■□□□□ 0.78
CCND1P24385 AC231657.2-201ENST00000624556 255 ntBASIC19.94■□□□□ 0.78
CCND1P24385 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCND1P24385 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.94■□□□□ 0.78
CCND1P24385 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.94■□□□□ 0.78
CCND1P24385 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCND1P24385 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.93■□□□□ 0.78
CCND1P24385 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.93■□□□□ 0.78
CCND1P24385 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCND1P24385 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCND1P24385 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCND1P24385 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.93■□□□□ 0.78
CCND1P24385 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCND1P24385 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCND1P24385 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCND1P24385 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCND1P24385 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCND1P24385 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCND1P24385 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.93■□□□□ 0.78
CCND1P24385 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.93■□□□□ 0.78
CCND1P24385 AL137784.2-201ENST00000607332 1000 ntBASIC19.93■□□□□ 0.78
CCND1P24385 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCND1P24385 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.93■□□□□ 0.78
CCND1P24385 AC005332.7-201ENST00000614046 2005 ntBASIC19.93■□□□□ 0.78
CCND1P24385 AC093503.3-201ENST00000624917 2352 ntBASIC19.93■□□□□ 0.78
CCND1P24385 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.93■□□□□ 0.78
CCND1P24385 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.93■□□□□ 0.78
CCND1P24385 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
CCND1P24385 AC125437.2-201ENST00000625180 2167 ntBASIC19.93■□□□□ 0.78
CCND1P24385 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CCND1P24385 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCND1P24385 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms