Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNOT4O95628 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CNOT4O95628 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT4O95628 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNOT4O95628 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT4O95628 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CNOT4O95628 KRT8P17-201ENST00000453110 1448 ntBASIC17.65■□□□□ 0.42
CNOT4O95628 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT4O95628 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CNOT4O95628 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT4O95628 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT4O95628 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT4O95628 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CNOT4O95628 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT4O95628 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT4O95628 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT4O95628 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CNOT4O95628 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CNOT4O95628 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CNOT4O95628 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.64■□□□□ 0.42
CNOT4O95628 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT4O95628 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT4O95628 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT4O95628 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT4O95628 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT4O95628 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.64■□□□□ 0.41
CNOT4O95628 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CNOT4O95628 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.64■□□□□ 0.41
CNOT4O95628 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT4O95628 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.64■□□□□ 0.41
CNOT4O95628 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT4O95628 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT4O95628 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT4O95628 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT4O95628 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT4O95628 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT4O95628 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.64■□□□□ 0.41
CNOT4O95628 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT4O95628 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.63■□□□□ 0.41
CNOT4O95628 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CNOT4O95628 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT4O95628 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT4O95628 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT4O95628 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT4O95628 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT4O95628 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT4O95628 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT4O95628 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.63■□□□□ 0.41
CNOT4O95628 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.63■□□□□ 0.41
CNOT4O95628 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT4O95628 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT4O95628 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.63■□□□□ 0.41
CNOT4O95628 AC069544.1-201ENST00000609399 999 ntBASIC17.63■□□□□ 0.41
CNOT4O95628 AC006557.6-201ENST00000623071 864 ntBASIC17.63■□□□□ 0.41
CNOT4O95628 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT4O95628 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CNOT4O95628 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT4O95628 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT4O95628 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT4O95628 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT4O95628 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CNOT4O95628 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.63■□□□□ 0.41
CNOT4O95628 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT4O95628 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CNOT4O95628 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT4O95628 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT4O95628 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT4O95628 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT4O95628 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CNOT4O95628 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.62■□□□□ 0.41
CNOT4O95628 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.62■□□□□ 0.41
CNOT4O95628 UBE2SP1-201ENST00000450587 669 ntBASIC17.62■□□□□ 0.41
CNOT4O95628 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT4O95628 AC008550.1-201ENST00000511500 884 ntBASIC17.62■□□□□ 0.41
CNOT4O95628 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT4O95628 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
CNOT4O95628 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT4O95628 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT4O95628 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT4O95628 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT4O95628 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT4O95628 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT4O95628 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT4O95628 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.62■□□□□ 0.41
CNOT4O95628 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT4O95628 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT4O95628 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms