Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 MIR3621-201ENST00000580529 85 ntBASIC14.06□□□□□ -0.16
LINC01546A6NGU7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01546A6NGU7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC01546A6NGU7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 AC141586.3-201ENST00000562166 1838 ntBASIC14.04□□□□□ -0.16
LINC01546A6NGU7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 FAM21FP-204ENST00000608637 956 ntBASIC14.04□□□□□ -0.16
LINC01546A6NGU7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC01546A6NGU7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms