Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 AC243732.1-201ENST00000612648 864 ntBASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 RARRES2P11-201ENST00000635158 484 ntBASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 AC116050.2-201ENST00000612102 1779 ntBASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 AC005082.1-201ENST00000413042 2259 ntBASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-4A0A0B4J246 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.9□□□□□ -0.19
TRAV8-4A0A0B4J246 LTB4R2-202ENST00000528054 3092 ntBASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-4A0A0B4J246 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 AC007225.1-201ENST00000566331 1836 ntBASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 AC034268.1-201ENST00000441047 882 ntBASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 AC004854.2-201ENST00000608450 1441 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms