Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 NEFHP1-201ENST00000412845 2629 ntBASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV18A0A075B6X5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV18A0A075B6X5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV18A0A075B6X5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAV18A0A075B6X5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV18A0A075B6X5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TRAV18A0A075B6X5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
TRAV18A0A075B6X5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAV18A0A075B6X5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV18A0A075B6X5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV18A0A075B6X5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV18A0A075B6X5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms