Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 FZD10-202ENST00000539839 3282 ntBASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 AC125437.2-201ENST00000625180 2167 ntBASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
TRBV25-1A0A075B6N4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 AC090340.1-201ENST00000620778 4980 ntBASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 AL049812.1-201ENST00000432563 2267 ntBASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV25-1A0A075B6N4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 AC020916.1-201ENST00000587762 1774 ntBASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 AC027612.3-201ENST00000413684 1047 ntBASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV25-1A0A075B6N4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms