Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 ZNF2-202ENST00000611463 3737 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 KBTBD4-201ENST00000395288 2460 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 SYT1-202ENST00000393240 3095 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 LINC01747-202ENST00000441568 2320 ntTSL 2 BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CNTNAP3Q9BZ76 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 TCF4-205ENST00000537578 2767 ntTSL 2 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 PFKM-210ENST00000547587 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 HAO2-202ENST00000361035 1668 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 LINC00486-201ENST00000414054 1794 ntTSL 4 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 ZSCAN20-201ENST00000361328 4316 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 Y_RNA.38-201ENST00000362617 102 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AC092642.1-201ENST00000392417 425 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 CXADRP1-201ENST00000398098 1095 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 RNA5SP265-201ENST00000411023 111 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AC073614.1-201ENST00000438690 650 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 WBP1LP1-201ENST00000460451 896 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AC126615.1-201ENST00000470084 630 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 RN7SL146P-201ENST00000472338 297 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 RN7SL201P-201ENST00000482306 296 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 MTCYBP18-201ENST00000501056 747 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AP003072.1-201ENST00000531740 145 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AL162311.2-201ENST00000550416 709 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AC012414.6-201ENST00000568241 401 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 DYM-207ENST00000578396 755 ntTSL 3 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 MIR3714-201ENST00000579507 65 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AC015688.2-201ENST00000584523 262 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 UBE2V2P2-201ENST00000587677 504 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AL161729.2-201ENST00000605700 456 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 RNU6ATAC35P-201ENST00000609276 444 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 RN7SL536P-201ENST00000612366 290 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 RN7SL545P-201ENST00000620547 290 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 RN7SL759P-201ENST00000620768 290 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AL359757.1-201ENST00000623176 255 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AC241377.2-202ENST00000636462 997 ntBASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
CNTNAP3Q9BZ76 RUFY3-204ENST00000502653 2342 ntTSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms