RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
MCPH1-201ENST00000344683 MYT1Q01538 1121 aa13.63□□□□□ -0.23
MCPH1-201ENST00000344683 CCER1Q8TC90 406 aaPredicted RBP13.28□□□□□ -0.28
MCPH1-201ENST00000344683 ERICH6Q7L0X2 663 aa13.27□□□□□ -0.28
MCPH1-201ENST00000344683 DCAF8L2P0C7V8 631 aa13.1□□□□□ -0.31
MCPH1-201ENST00000344683 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
MCPH1-201ENST00000344683 YTHDC1Q96MU7 727 aaKnown RBP12.9□□□□□ -0.34
MCPH1-201ENST00000344683 ZEB1P37275 1124 aaPredicted RBP12.8□□□□□ -0.36
MCPH1-201ENST00000344683 TTBK1Q5TCY1 1321 aaPredicted RBP12.77□□□□□ -0.37
MCPH1-201ENST00000344683 APLP2Q06481 763 aa12.75□□□□□ -0.37
MCPH1-201ENST00000344683 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
MCPH1-201ENST00000344683 NEFLP07196 543 aa12.72□□□□□ -0.37
MCPH1-201ENST00000344683 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
MCPH1-201ENST00000344683 NISCHQ9Y2I1 1504 aa12.53□□□□□ -0.4
MCPH1-201ENST00000344683 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.4
MCPH1-201ENST00000344683 PCGF6Q9BYE7 350 aa12.49□□□□□ -0.41
MCPH1-201ENST00000344683 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
MCPH1-201ENST00000344683 RTL5Q5HYW3 569 aaPredicted RBP12.33□□□□□ -0.44
MCPH1-201ENST00000344683 SHROOM4Q9ULL8 1493 aa12.24□□□□□ -0.45
MCPH1-201ENST00000344683 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
MCPH1-201ENST00000344683 GLIPR1L2Q4G1C9 344 aa12.07□□□□□ -0.48
MCPH1-201ENST00000344683 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
MCPH1-201ENST00000344683 HRCP23327 699 aa11.95□□□□□ -0.5
MCPH1-201ENST00000344683 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
MCPH1-201ENST00000344683 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
MCPH1-201ENST00000344683 TRIM41Q8WV44 630 aa11.91□□□□□ -0.5
MCPH1-201ENST00000344683 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
MCPH1-201ENST00000344683 MYT1LQ9UL68 1186 aa11.86□□□□□ -0.51
MCPH1-201ENST00000344683 UBTFP17480 764 aaKnown RBP11.85□□□□□ -0.51
MCPH1-201ENST00000344683 RANGAP1P46060 587 aaPredicted RBP11.82□□□□□ -0.52
MCPH1-201ENST00000344683 ANP32BQ92688 251 aaKnown RBP11.78□□□□□ -0.52
MCPH1-201ENST00000344683 DIEXFQ68CQ4 756 aaKnown RBP11.78□□□□□ -0.52
MCPH1-201ENST00000344683 EIF5BO60841 1220 aaKnown RBP11.77□□□□□ -0.53
MCPH1-201ENST00000344683 ANP32AP39687 249 aaKnown RBP11.73□□□□□ -0.53
MCPH1-201ENST00000344683 POLR3GLQ9BT43 218 aa11.73□□□□□ -0.53
MCPH1-201ENST00000344683 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
MCPH1-201ENST00000344683 GTF3C3Q9Y5Q9 886 aa11.67□□□□□ -0.54
MCPH1-201ENST00000344683 TNNT2P45379 298 aaPredicted RBP11.56□□□□□ -0.56
MCPH1-201ENST00000344683 SLC4A1APQ9BWU0 796 aaKnown RBP11.55□□□□□ -0.56
MCPH1-201ENST00000344683 ANP32CO43423 234 aa11.55□□□□□ -0.56
MCPH1-201ENST00000344683 PPARGC1BQ86YN6 1023 aaKnown RBP11.53□□□□□ -0.56
MCPH1-201ENST00000344683 BCANQ96GW7 911 aa11.53□□□□□ -0.56
MCPH1-201ENST00000344683 ITGAEP38570 1179 aa11.49□□□□□ -0.57
MCPH1-201ENST00000344683 CANXP27824 592 aaKnown RBP11.49□□□□□ -0.57
MCPH1-201ENST00000344683 CNGB1Q14028 1251 aaPredicted RBP11.49□□□□□ -0.57
MCPH1-201ENST00000344683 UPF2Q9HAU5 1272 aaKnown RBP11.47□□□□□ -0.57
MCPH1-201ENST00000344683 ACIN1Q9UKV3 1341 aaKnown RBP11.47□□□□□ -0.57
MCPH1-201ENST00000344683 HSP90AA1P07900 732 aaKnown RBP11.46□□□□□ -0.57
MCPH1-201ENST00000344683 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
MCPH1-201ENST00000344683 NEFMP07197 916 aa11.43□□□□□ -0.58
MCPH1-201ENST00000344683 NPM2Q86SE8 214 aaKnown RBP11.39□□□□□ -0.59
MCPH1-201ENST00000344683 TRIM44Q96DX7 344 aaPredicted RBP11.38□□□□□ -0.59
MCPH1-201ENST00000344683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.38□□□□□ -0.59
MCPH1-201ENST00000344683 ANP32EQ9BTT0 268 aa11.37□□□□□ -0.59
MCPH1-201ENST00000344683 CDK11BP21127 795 aaKnown RBP11.32□□□□□ -0.6
MCPH1-201ENST00000344683 NBR1Q14596 966 aa11.31□□□□□ -0.6
MCPH1-201ENST00000344683 NCLP19338 710 aaKnown RBP11.3□□□□□ -0.6
MCPH1-201ENST00000344683 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
MCPH1-201ENST00000344683 FKBP8Q14318 412 aa11.24□□□□□ -0.61
MCPH1-201ENST00000344683 ERICH6BQ5W0A0 696 aa11.24□□□□□ -0.61
MCPH1-201ENST00000344683 NEUROD1Q13562 356 aa11.24□□□□□ -0.61
MCPH1-201ENST00000344683 FAM50AQ14320 339 aaKnown RBP11.23□□□□□ -0.61
MCPH1-201ENST00000344683 TRIM52Q96A61 297 aa11.23□□□□□ -0.61
MCPH1-201ENST00000344683 BECN1Q14457 450 aa11.21□□□□□ -0.61
MCPH1-201ENST00000344683 SLC24A1O60721 1099 aa11.21□□□□□ -0.61
MCPH1-201ENST00000344683 LOC105371045A0A1W2PR82 267 aa11.2□□□□□ -0.62
MCPH1-201ENST00000344683 CHIC1Q5VXU3 224 aa11.2□□□□□ -0.62
MCPH1-201ENST00000344683 BCL11AQ9H165 835 aa11.2□□□□□ -0.62
MCPH1-201ENST00000344683 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.19□□□□□ -0.62
MCPH1-201ENST00000344683 GOLGA6L22H0YM25 854 aa11.18□□□□□ -0.62
MCPH1-201ENST00000344683 CCDC136Q96JN2 1154 aa11.15□□□□□ -0.62
MCPH1-201ENST00000344683 ARXQ96QS3 562 aa11.15□□□□□ -0.62
MCPH1-201ENST00000344683 DNTTIP2Q5QJE6 756 aaKnown RBP11.14□□□□□ -0.63
MCPH1-201ENST00000344683 NAP1L5Q96NT1 182 aaPredicted RBP11.14□□□□□ -0.63
MCPH1-201ENST00000344683 PTMAP06454 111 aaKnown RBP11.1□□□□□ -0.63
MCPH1-201ENST00000344683 ZNF326Q5BKZ1 582 aaKnown RBP11.09□□□□□ -0.63
MCPH1-201ENST00000344683 PPM1GO15355 546 aaPredicted RBP11.08□□□□□ -0.64
MCPH1-201ENST00000344683 GOLGA6L6A8MZA4 724 aa11.07□□□□□ -0.64
MCPH1-201ENST00000344683 HNRNPUQ00839 825 aaKnown RBP eCLIP11.06□□□□□ -0.64
MCPH1-201ENST00000344683 ZRSR1Q15695 479 aaKnown RBP11.06□□□□□ -0.64
MCPH1-201ENST00000344683 CHAF1AQ13111 956 aaPredicted RBP11.05□□□□□ -0.64
MCPH1-201ENST00000344683 MYH16Q9H6N6 1097 aa11.05□□□□□ -0.64
MCPH1-201ENST00000344683 NRDCO43847 1150 aa11.01□□□□□ -0.65
MCPH1-201ENST00000344683 ABCC9O60706 1549 aa10.99□□□□□ -0.65
MCPH1-201ENST00000344683 CASC1Q6TDU7 716 aa10.98□□□□□ -0.65
MCPH1-201ENST00000344683 L1TD1Q5T7N2 865 aaKnown RBP10.98□□□□□ -0.65
MCPH1-201ENST00000344683 CCDC180Q9P1Z9 1646 aa10.97□□□□□ -0.65
MCPH1-201ENST00000344683 SCAF1Q9H7N4 1312 aaKnown RBP10.97□□□□□ -0.65
MCPH1-201ENST00000344683 MSNP26038 577 aaKnown RBP10.96□□□□□ -0.65
MCPH1-201ENST00000344683 TONSLQ96HA7 1378 aa10.96□□□□□ -0.65
MCPH1-201ENST00000344683 TMC1Q8TDI8 760 aa10.95□□□□□ -0.66
MCPH1-201ENST00000344683 FAM9BQ8IZU0 186 aa10.95□□□□□ -0.66
MCPH1-201ENST00000344683 WDR43Q15061 677 aaKnown RBP eCLIP10.93□□□□□ -0.66
MCPH1-201ENST00000344683 TNNT3P45378 269 aaPredicted RBP10.93□□□□□ -0.66
MCPH1-201ENST00000344683 NOP58Q9Y2X3 529 aaKnown RBP10.93□□□□□ -0.66
MCPH1-201ENST00000344683 DCAF1Q9Y4B6 1507 aa10.9□□□□□ -0.66
MCPH1-201ENST00000344683 RTN4Q9NQC3 1192 aaKnown RBP10.9□□□□□ -0.66
MCPH1-201ENST00000344683 PTMSP20962 102 aa10.89□□□□□ -0.67
MCPH1-201ENST00000344683 AMER1Q5JTC6 1135 aaPredicted RBP10.87□□□□□ -0.67
MCPH1-201ENST00000344683 USP35Q9P2H5 1018 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms