RNA–Protein interactions for RNA: ENST00000620547.1

RN7SL545P-201, Transcript of RNA, 7SL, cytoplasmic 545, pseudogene, humanhuman

BASIC

Gene RN7SL545P, Length 290 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL545P-201ENST00000620547 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
RN7SL545P-201ENST00000620547 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
RN7SL545P-201ENST00000620547 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
RN7SL545P-201ENST00000620547 PHF23Q9BUL5 403 aaPredicted RBP20.98■□□□□ 0.95
RN7SL545P-201ENST00000620547 POTEDQ86YR6 584 aa20.24■□□□□ 0.83
RN7SL545P-201ENST00000620547 FOXD1Q16676 465 aa20.09■□□□□ 0.81
RN7SL545P-201ENST00000620547 MSH5O43196 834 aa19.02■□□□□ 0.64
RN7SL545P-201ENST00000620547 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
RN7SL545P-201ENST00000620547 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
RN7SL545P-201ENST00000620547 ADRA2BP18089 450 aa17.98■□□□□ 0.47
RN7SL545P-201ENST00000620547 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
RN7SL545P-201ENST00000620547 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
RN7SL545P-201ENST00000620547 CACNB1Q02641 598 aaPredicted RBP16.89■□□□□ 0.29
RN7SL545P-201ENST00000620547 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
RN7SL545P-201ENST00000620547 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
RN7SL545P-201ENST00000620547 ABCC9O60706 1549 aa16.46■□□□□ 0.23
RN7SL545P-201ENST00000620547 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
RN7SL545P-201ENST00000620547 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
RN7SL545P-201ENST00000620547 DCAF8L1A6NGE4 600 aa16.08■□□□□ 0.16
RN7SL545P-201ENST00000620547 CCDC180Q9P1Z9 1646 aa15.94■□□□□ 0.14
RN7SL545P-201ENST00000620547 C1QBPQ07021 282 aaKnown RBP15.87■□□□□ 0.13
RN7SL545P-201ENST00000620547 HOXD11P31277 338 aaPredicted RBP15.86■□□□□ 0.13
RN7SL545P-201ENST00000620547 DNAJC5BQ9UF47 199 aa15.8■□□□□ 0.12
RN7SL545P-201ENST00000620547 POTEHQ6S545 545 aa15.63■□□□□ 0.09
RN7SL545P-201ENST00000620547 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
RN7SL545P-201ENST00000620547 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
RN7SL545P-201ENST00000620547 RB1CC1Q8TDY2 1594 aa15.43■□□□□ 0.06
RN7SL545P-201ENST00000620547 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
RN7SL545P-201ENST00000620547 PELP1Q8IZL8 1130 aaKnown RBP15.33■□□□□ 0.04
RN7SL545P-201ENST00000620547 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
RN7SL545P-201ENST00000620547 NACADO15069 1562 aa15.19■□□□□ 0.02
RN7SL545P-201ENST00000620547 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
RN7SL545P-201ENST00000620547 UNC13AQ9UPW8 1703 aa15.07■□□□□ 0
RN7SL545P-201ENST00000620547 MYT1Q01538 1121 aa15.07■□□□□ 0
RN7SL545P-201ENST00000620547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.01
RN7SL545P-201ENST00000620547 BICRAQ9NZM4 1560 aa14.97□□□□□ -0.01
RN7SL545P-201ENST00000620547 DSG3P32926 999 aa14.9□□□□□ -0.02
RN7SL545P-201ENST00000620547 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
RN7SL545P-201ENST00000620547 HRCP23327 699 aa14.85□□□□□ -0.03
RN7SL545P-201ENST00000620547 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
RN7SL545P-201ENST00000620547 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
RN7SL545P-201ENST00000620547 SPINK5Q9NQ38 1064 aaPredicted RBP14.78□□□□□ -0.04
RN7SL545P-201ENST00000620547 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.04
RN7SL545P-201ENST00000620547 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
RN7SL545P-201ENST00000620547 SHROOM4Q9ULL8 1493 aa14.69□□□□□ -0.06
RN7SL545P-201ENST00000620547 CAPN15O75808 1086 aa14.68□□□□□ -0.06
RN7SL545P-201ENST00000620547 EIF4G1Q04637 1599 aaKnown RBP14.66□□□□□ -0.06
RN7SL545P-201ENST00000620547 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
RN7SL545P-201ENST00000620547 ZCCHC6Q5VYS8 1495 aaKnown RBP14.47□□□□□ -0.09
RN7SL545P-201ENST00000620547 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
RN7SL545P-201ENST00000620547 DCAF1Q9Y4B6 1507 aa14.43□□□□□ -0.1
RN7SL545P-201ENST00000620547 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
RN7SL545P-201ENST00000620547 TTBK1Q5TCY1 1321 aaPredicted RBP14.34□□□□□ -0.11
RN7SL545P-201ENST00000620547 ABCB7O75027 752 aa14.33□□□□□ -0.12
RN7SL545P-201ENST00000620547 ZEB1P37275 1124 aaPredicted RBP14.32□□□□□ -0.12
RN7SL545P-201ENST00000620547 CUX2O14529 1486 aa14.31□□□□□ -0.12
RN7SL545P-201ENST00000620547 ERCC6Q03468 1493 aa14.27□□□□□ -0.12
RN7SL545P-201ENST00000620547 TRHP20396 242 aaPredicted RBP14.24□□□□□ -0.13
RN7SL545P-201ENST00000620547 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
RN7SL545P-201ENST00000620547 SP7Q8TDD2 431 aaPredicted RBP14.22□□□□□ -0.13
RN7SL545P-201ENST00000620547 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
RN7SL545P-201ENST00000620547 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
RN7SL545P-201ENST00000620547 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
RN7SL545P-201ENST00000620547 PCGF6Q9BYE7 350 aa14.08□□□□□ -0.16
RN7SL545P-201ENST00000620547 SLC4A2P04920 1241 aa14.05□□□□□ -0.16
RN7SL545P-201ENST00000620547 NCAPD3P42695 1498 aa14.01□□□□□ -0.17
RN7SL545P-201ENST00000620547 NESP48681 1621 aa14.01□□□□□ -0.17
RN7SL545P-201ENST00000620547 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
RN7SL545P-201ENST00000620547 APLP2Q06481 763 aa13.96□□□□□ -0.17
RN7SL545P-201ENST00000620547 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
RN7SL545P-201ENST00000620547 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
RN7SL545P-201ENST00000620547 PPARGC1BQ86YN6 1023 aaKnown RBP13.9□□□□□ -0.18
RN7SL545P-201ENST00000620547 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
RN7SL545P-201ENST00000620547 HMGXB3Q12766 1538 aa13.88□□□□□ -0.19
RN7SL545P-201ENST00000620547 CENPBP07199 599 aaPredicted RBP13.82□□□□□ -0.2
RN7SL545P-201ENST00000620547 SMARCA4P51532 1647 aa13.82□□□□□ -0.2
RN7SL545P-201ENST00000620547 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
RN7SL545P-201ENST00000620547 KIF21AQ7Z4S6 1674 aa13.8□□□□□ -0.2
RN7SL545P-201ENST00000620547 LAMC3Q9Y6N6 1575 aa13.79□□□□□ -0.2
RN7SL545P-201ENST00000620547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
RN7SL545P-201ENST00000620547 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
RN7SL545P-201ENST00000620547 ACIN1Q9UKV3 1341 aaKnown RBP13.77□□□□□ -0.21
RN7SL545P-201ENST00000620547 SUPT5HO00267 1087 aaKnown RBP13.75□□□□□ -0.21
RN7SL545P-201ENST00000620547 PIP4P2Q8N4L2 257 aa13.75□□□□□ -0.21
RN7SL545P-201ENST00000620547 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
RN7SL545P-201ENST00000620547 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
RN7SL545P-201ENST00000620547 BAZ1AQ9NRL2 1556 aaPredicted RBP13.68□□□□□ -0.22
RN7SL545P-201ENST00000620547 POLA2Q14181 598 aa13.68□□□□□ -0.22
RN7SL545P-201ENST00000620547 HAX1O00165 279 aa13.67□□□□□ -0.22
RN7SL545P-201ENST00000620547 MRC2Q9UBG0 1479 aa13.66□□□□□ -0.22
RN7SL545P-201ENST00000620547 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
RN7SL545P-201ENST00000620547 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
RN7SL545P-201ENST00000620547 PEG3Q9GZU2 1588 aa13.63□□□□□ -0.23
RN7SL545P-201ENST00000620547 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
RN7SL545P-201ENST00000620547 WDR62O43379 1518 aa13.61□□□□□ -0.23
RN7SL545P-201ENST00000620547 EVX2Q03828 476 aa13.6□□□□□ -0.23
RN7SL545P-201ENST00000620547 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
RN7SL545P-201ENST00000620547 REM2Q8IYK8 340 aaPredicted RBP13.57□□□□□ -0.24
RN7SL545P-201ENST00000620547 MROH2BQ7Z745 1585 aa13.56□□□□□ -0.24
RN7SL545P-201ENST00000620547 CEP164Q9UPV0 1460 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms