RNA–Protein interactions for RNA: ENST00000618397.1

AC138393.3-201, humanhuman

TSL 3 BASIC

Gene AC138393.3, Length 573 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138393.3-201ENST00000618397 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.49
AC138393.3-201ENST00000618397 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
AC138393.3-201ENST00000618397 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
AC138393.3-201ENST00000618397 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
AC138393.3-201ENST00000618397 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
AC138393.3-201ENST00000618397 FOXD1Q16676 465 aa19.61■□□□□ 0.73
AC138393.3-201ENST00000618397 MSH5O43196 834 aa18.67■□□□□ 0.58
AC138393.3-201ENST00000618397 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
AC138393.3-201ENST00000618397 PIAS4Q8N2W9 510 aaPredicted RBP18.12■□□□□ 0.49
AC138393.3-201ENST00000618397 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
AC138393.3-201ENST00000618397 ADRA2BP18089 450 aa17.73■□□□□ 0.43
AC138393.3-201ENST00000618397 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
AC138393.3-201ENST00000618397 DMRT2Q9Y5R5 561 aa16.46■□□□□ 0.23
AC138393.3-201ENST00000618397 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
AC138393.3-201ENST00000618397 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
AC138393.3-201ENST00000618397 PPP4R3CPQ6ZMV5 832 aa15.92■□□□□ 0.14
AC138393.3-201ENST00000618397 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
AC138393.3-201ENST00000618397 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
AC138393.3-201ENST00000618397 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
AC138393.3-201ENST00000618397 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
AC138393.3-201ENST00000618397 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
AC138393.3-201ENST00000618397 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
AC138393.3-201ENST00000618397 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
AC138393.3-201ENST00000618397 POTEHQ6S545 545 aa15.25■□□□□ 0.03
AC138393.3-201ENST00000618397 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
AC138393.3-201ENST00000618397 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
AC138393.3-201ENST00000618397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
AC138393.3-201ENST00000618397 KCNA4P22459 653 aa14.75□□□□□ -0.05
AC138393.3-201ENST00000618397 DSG3P32926 999 aa14.57□□□□□ -0.08
AC138393.3-201ENST00000618397 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
AC138393.3-201ENST00000618397 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
AC138393.3-201ENST00000618397 CAPN15O75808 1086 aa14.43□□□□□ -0.1
AC138393.3-201ENST00000618397 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
AC138393.3-201ENST00000618397 APLP2Q06481 763 aa14.17□□□□□ -0.14
AC138393.3-201ENST00000618397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
AC138393.3-201ENST00000618397 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
AC138393.3-201ENST00000618397 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
AC138393.3-201ENST00000618397 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
AC138393.3-201ENST00000618397 ZNF219Q9P2Y4 722 aaPredicted RBP14.07□□□□□ -0.16
AC138393.3-201ENST00000618397 ABCB7O75027 752 aa14.04□□□□□ -0.16
AC138393.3-201ENST00000618397 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
AC138393.3-201ENST00000618397 MYCNP04198 464 aaPredicted RBP13.94□□□□□ -0.18
AC138393.3-201ENST00000618397 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
AC138393.3-201ENST00000618397 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
AC138393.3-201ENST00000618397 SP7Q8TDD2 431 aaPredicted RBP13.9□□□□□ -0.18
AC138393.3-201ENST00000618397 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
AC138393.3-201ENST00000618397 POLA2Q14181 598 aa13.72□□□□□ -0.21
AC138393.3-201ENST00000618397 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
AC138393.3-201ENST00000618397 ZBTB22O15209 634 aa13.53□□□□□ -0.24
AC138393.3-201ENST00000618397 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
AC138393.3-201ENST00000618397 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
AC138393.3-201ENST00000618397 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
AC138393.3-201ENST00000618397 HAX1O00165 279 aa13.4□□□□□ -0.26
AC138393.3-201ENST00000618397 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
AC138393.3-201ENST00000618397 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
AC138393.3-201ENST00000618397 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
AC138393.3-201ENST00000618397 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
AC138393.3-201ENST00000618397 EVX2Q03828 476 aa13.19□□□□□ -0.3
AC138393.3-201ENST00000618397 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
AC138393.3-201ENST00000618397 FBLN2P98095 1184 aa13.12□□□□□ -0.31
AC138393.3-201ENST00000618397 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
AC138393.3-201ENST00000618397 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
AC138393.3-201ENST00000618397 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
AC138393.3-201ENST00000618397 LHX8Q68G74 356 aa13.01□□□□□ -0.33
AC138393.3-201ENST00000618397 MKRN4PQ13434 485 aaPredicted RBP12.97□□□□□ -0.33
AC138393.3-201ENST00000618397 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
AC138393.3-201ENST00000618397 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
AC138393.3-201ENST00000618397 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
AC138393.3-201ENST00000618397 GABBR2O75899 941 aa12.84□□□□□ -0.35
AC138393.3-201ENST00000618397 C19orf67A6NJJ6 358 aa12.83□□□□□ -0.36
AC138393.3-201ENST00000618397 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
AC138393.3-201ENST00000618397 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
AC138393.3-201ENST00000618397 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
AC138393.3-201ENST00000618397 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
AC138393.3-201ENST00000618397 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
AC138393.3-201ENST00000618397 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
AC138393.3-201ENST00000618397 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
AC138393.3-201ENST00000618397 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
AC138393.3-201ENST00000618397 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
AC138393.3-201ENST00000618397 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
AC138393.3-201ENST00000618397 CD44P16070 742 aaKnown RBP12.35□□□□□ -0.43
AC138393.3-201ENST00000618397 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
AC138393.3-201ENST00000618397 FARP1Q9Y4F1 1045 aaPredicted RBP12.35□□□□□ -0.43
AC138393.3-201ENST00000618397 CLCN6P51797 869 aa12.33□□□□□ -0.44
AC138393.3-201ENST00000618397 POTEMA6NI47 508 aa12.31□□□□□ -0.44
AC138393.3-201ENST00000618397 DCBLD2Q96PD2 775 aa12.31□□□□□ -0.44
AC138393.3-201ENST00000618397 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
AC138393.3-201ENST00000618397 POTEGQ6S5H5 508 aa12.24□□□□□ -0.45
AC138393.3-201ENST00000618397 CREBZFQ9NS37 354 aa12.23□□□□□ -0.45
AC138393.3-201ENST00000618397 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
AC138393.3-201ENST00000618397 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
AC138393.3-201ENST00000618397 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
AC138393.3-201ENST00000618397 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
AC138393.3-201ENST00000618397 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
AC138393.3-201ENST00000618397 GALR2O43603 387 aaPredicted RBP12.05□□□□□ -0.48
AC138393.3-201ENST00000618397 PROM2Q8N271 834 aa12.04□□□□□ -0.48
AC138393.3-201ENST00000618397 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
AC138393.3-201ENST00000618397 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
AC138393.3-201ENST00000618397 PHF12Q96QT6 1004 aa11.92□□□□□ -0.5
AC138393.3-201ENST00000618397 LCE2DQ5TA82 110 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms