Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC090132.1-201ENST00000524071 1480 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 MAPK10-371ENST00000641952 5209 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL590635.1-201ENST00000406314 586 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL672212.1-201ENST00000422246 400 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC234771.2-201ENST00000445718 597 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC091133.5-201ENST00000603088 301 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 MIR6729-201ENST00000618194 65 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL161420.1-201ENST00000619393 264 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC073857.1-201ENST00000625082 1054 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL139254.2-202ENST00000641937 1156 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC027279.1-201ENST00000568885 4284 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 CASC19-205ENST00000641013 1411 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC025040.2-201ENST00000558657 1852 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL389925.1-201ENST00000432257 728 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 CLUHP1-201ENST00000435012 1190 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC026336.1-201ENST00000466577 351 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC090568.1-201ENST00000509499 856 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 CYCSP38-201ENST00000559840 322 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 TEX41-218ENST00000596540 882 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AL359694.1-201ENST00000403247 604 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 EEF1GP7-201ENST00000422983 703 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 GAPDHP73-201ENST00000423411 1007 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 LAPTM4BP1-201ENST00000447781 690 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 NPM1P19-201ENST00000450070 712 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 IGKV1OR2-2-201ENST00000451163 355 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 NMNAT1P3-201ENST00000457517 888 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC084121.1-201ENST00000533882 835 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CASC19-212ENST00000641153 1287 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AL359955.1-201ENST00000455242 3275 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 OR8B9P-202ENST00000642028 5216 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AL354707.3-201ENST00000427308 331 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC245291.3-201ENST00000443400 292 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 MEF2AP1-201ENST00000454867 863 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC091874.2-201ENST00000505889 720 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CLUHP10-201ENST00000631979 980 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms