RNA–Protein interactions for RNA: ENST00000330501.11

ZNF397-202, Transcript of zinc finger protein 397, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF397, Length 5,251 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-202ENST00000330501 NISCHQ9Y2I1 1504 aa14.12□□□□□ -0.15
ZNF397-202ENST00000330501 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
ZNF397-202ENST00000330501 MYT1Q01538 1121 aa13.37□□□□□ -0.27
ZNF397-202ENST00000330501 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
ZNF397-202ENST00000330501 SUPT5HO00267 1087 aaKnown RBP12.5□□□□□ -0.41
ZNF397-202ENST00000330501 SHROOM4Q9ULL8 1493 aa12.49□□□□□ -0.41
ZNF397-202ENST00000330501 TTBK1Q5TCY1 1321 aaPredicted RBP12.38□□□□□ -0.43
ZNF397-202ENST00000330501 FAM9AQ8IZU1 332 aaPredicted RBP12.34□□□□□ -0.43
ZNF397-202ENST00000330501 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
ZNF397-202ENST00000330501 CCDC180Q9P1Z9 1646 aa12.11□□□□□ -0.47
ZNF397-202ENST00000330501 ABCC9O60706 1549 aa12.08□□□□□ -0.48
ZNF397-202ENST00000330501 CENPBP07199 599 aaPredicted RBP12.06□□□□□ -0.48
ZNF397-202ENST00000330501 APLP2Q06481 763 aa12.05□□□□□ -0.48
ZNF397-202ENST00000330501 CCER1Q8TC90 406 aaPredicted RBP11.97□□□□□ -0.49
ZNF397-202ENST00000330501 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
ZNF397-202ENST00000330501 ZEB1P37275 1124 aaPredicted RBP11.77□□□□□ -0.52
ZNF397-202ENST00000330501 RB1CC1Q8TDY2 1594 aa11.74□□□□□ -0.53
ZNF397-202ENST00000330501 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
ZNF397-202ENST00000330501 ZCCHC6Q5VYS8 1495 aaKnown RBP11.71□□□□□ -0.53
ZNF397-202ENST00000330501 PABPN1Q86U42 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
ZNF397-202ENST00000330501 NACADO15069 1562 aa11.66□□□□□ -0.54
ZNF397-202ENST00000330501 EHMT2Q96KQ7 1210 aa11.66□□□□□ -0.54
ZNF397-202ENST00000330501 UBTFP17480 764 aaKnown RBP11.64□□□□□ -0.55
ZNF397-202ENST00000330501 HRCP23327 699 aa11.55□□□□□ -0.56
ZNF397-202ENST00000330501 SCRIBQ14160 1630 aa11.55□□□□□ -0.56
ZNF397-202ENST00000330501 ATP1B4Q9UN42 357 aaPredicted RBP11.53□□□□□ -0.56
ZNF397-202ENST00000330501 PCGF6Q9BYE7 350 aa11.53□□□□□ -0.56
ZNF397-202ENST00000330501 DCAF1Q9Y4B6 1507 aa11.49□□□□□ -0.57
ZNF397-202ENST00000330501 RANGAP1P46060 587 aaPredicted RBP11.45□□□□□ -0.58
ZNF397-202ENST00000330501 NEFLP07196 543 aa11.44□□□□□ -0.58
ZNF397-202ENST00000330501 GLIPR1L2Q4G1C9 344 aa11.38□□□□□ -0.59
ZNF397-202ENST00000330501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
ZNF397-202ENST00000330501 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
ZNF397-202ENST00000330501 MYO15BQ96JP2 1530 aa11.33□□□□□ -0.6
ZNF397-202ENST00000330501 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
ZNF397-202ENST00000330501 CHIC1Q5VXU3 224 aa11.27□□□□□ -0.61
ZNF397-202ENST00000330501 MYT1LQ9UL68 1186 aa11.26□□□□□ -0.61
ZNF397-202ENST00000330501 BAZ1AQ9NRL2 1556 aaPredicted RBP11.19□□□□□ -0.62
ZNF397-202ENST00000330501 BAZ1BQ9UIG0 1483 aaKnown RBP11.18□□□□□ -0.62
ZNF397-202ENST00000330501 GTF3C3Q9Y5Q9 886 aa11.16□□□□□ -0.62
ZNF397-202ENST00000330501 FBLN2P98095 1184 aa11.15□□□□□ -0.62
ZNF397-202ENST00000330501 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
ZNF397-202ENST00000330501 BCL11AQ9H165 835 aa11.13□□□□□ -0.63
ZNF397-202ENST00000330501 DAXXQ9UER7 740 aaPredicted RBP11.12□□□□□ -0.63
ZNF397-202ENST00000330501 TRIM26Q12899 539 aaPredicted RBP11.11□□□□□ -0.63
ZNF397-202ENST00000330501 CDK11AQ9UQ88 783 aaPredicted RBP11.11□□□□□ -0.63
ZNF397-202ENST00000330501 EIF5BO60841 1220 aaKnown RBP11.1□□□□□ -0.63
ZNF397-202ENST00000330501 SMARCA2P51531 1590 aa11.08□□□□□ -0.63
ZNF397-202ENST00000330501 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
ZNF397-202ENST00000330501 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.64
ZNF397-202ENST00000330501 NPM1P06748 294 aaKnown RBP eCLIP11.05□□□□□ -0.64
ZNF397-202ENST00000330501 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
ZNF397-202ENST00000330501 EEA1Q15075 1411 aa11.04□□□□□ -0.64
ZNF397-202ENST00000330501 ERCC6Q03468 1493 aa11.03□□□□□ -0.64
ZNF397-202ENST00000330501 PPARGC1BQ86YN6 1023 aaKnown RBP11.01□□□□□ -0.65
ZNF397-202ENST00000330501 CLSPNQ9HAW4 1339 aa10.98□□□□□ -0.65
ZNF397-202ENST00000330501 ANP32EQ9BTT0 268 aa10.96□□□□□ -0.66
ZNF397-202ENST00000330501 ITGAEP38570 1179 aa10.96□□□□□ -0.66
ZNF397-202ENST00000330501 CHMP7Q8WUX9 453 aaPredicted RBP10.96□□□□□ -0.66
ZNF397-202ENST00000330501 FAM50AQ14320 339 aaKnown RBP10.95□□□□□ -0.66
ZNF397-202ENST00000330501 PDS5BQ9NTI5 1447 aa10.94□□□□□ -0.66
ZNF397-202ENST00000330501 LOC105371045A0A1W2PR82 267 aa10.93□□□□□ -0.66
ZNF397-202ENST00000330501 DIEXFQ68CQ4 756 aaKnown RBP10.91□□□□□ -0.66
ZNF397-202ENST00000330501 WRNQ14191 1432 aaPredicted RBP eCLIP10.9□□□□□ -0.66
ZNF397-202ENST00000330501 KIF27Q86VH2 1401 aa10.9□□□□□ -0.66
ZNF397-202ENST00000330501 SCAF1Q9H7N4 1312 aaKnown RBP10.89□□□□□ -0.67
ZNF397-202ENST00000330501 ZNF316A6NFI3 1004 aaPredicted RBP10.89□□□□□ -0.67
ZNF397-202ENST00000330501 TRIM52Q96A61 297 aa10.87□□□□□ -0.67
ZNF397-202ENST00000330501 ESF1Q9H501 851 aaKnown RBP10.86□□□□□ -0.67
ZNF397-202ENST00000330501 TOP2AP11388 1531 aaKnown RBP10.83□□□□□ -0.68
ZNF397-202ENST00000330501 CECR2Q9BXF3 1484 aa10.82□□□□□ -0.68
ZNF397-202ENST00000330501 GOLGA3Q08378 1498 aa10.81□□□□□ -0.68
ZNF397-202ENST00000330501 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
ZNF397-202ENST00000330501 P3H3Q8IVL6 736 aa10.79□□□□□ -0.68
ZNF397-202ENST00000330501 ABCC8Q09428 1581 aa10.79□□□□□ -0.68
ZNF397-202ENST00000330501 CEP164Q9UPV0 1460 aa10.78□□□□□ -0.68
ZNF397-202ENST00000330501 SMARCA4P51532 1647 aa10.77□□□□□ -0.69
ZNF397-202ENST00000330501 MROH2BQ7Z745 1585 aa10.76□□□□□ -0.69
ZNF397-202ENST00000330501 ATAD2BQ9ULI0 1458 aa10.75□□□□□ -0.69
ZNF397-202ENST00000330501 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
ZNF397-202ENST00000330501 ZNF777Q9ULD5 760 aaPredicted RBP10.73□□□□□ -0.69
ZNF397-202ENST00000330501 MTUS2Q5JR59 1369 aa10.72□□□□□ -0.69
ZNF397-202ENST00000330501 CLIP1P30622 1438 aa10.72□□□□□ -0.69
ZNF397-202ENST00000330501 ANP32AP39687 249 aaKnown RBP10.71□□□□□ -0.69
ZNF397-202ENST00000330501 CCDC88BA6NC98 1476 aa10.71□□□□□ -0.69
ZNF397-202ENST00000330501 PLEKHD1A6NEE1 506 aa10.71□□□□□ -0.69
ZNF397-202ENST00000330501 TSPY4P0CV99 314 aa10.7□□□□□ -0.7
ZNF397-202ENST00000330501 TSPY10P0CW01 314 aa10.7□□□□□ -0.7
ZNF397-202ENST00000330501 POLR3GLQ9BT43 218 aa10.7□□□□□ -0.7
ZNF397-202ENST00000330501 SLC4A1APQ9BWU0 796 aaKnown RBP10.68□□□□□ -0.7
ZNF397-202ENST00000330501 CARMIL2Q6F5E8 1435 aa10.67□□□□□ -0.7
ZNF397-202ENST00000330501 TNNT2P45379 298 aaPredicted RBP10.67□□□□□ -0.7
ZNF397-202ENST00000330501 FHAD1B1AJZ9 1412 aa10.67□□□□□ -0.7
ZNF397-202ENST00000330501 CUX2O14529 1486 aa10.67□□□□□ -0.7
ZNF397-202ENST00000330501 BCANQ96GW7 911 aa10.66□□□□□ -0.7
ZNF397-202ENST00000330501 ARID3CA6NKF2 412 aa10.66□□□□□ -0.7
ZNF397-202ENST00000330501 TNIKQ9UKE5 1360 aa10.65□□□□□ -0.7
ZNF397-202ENST00000330501 SOGA1O94964 1423 aa10.65□□□□□ -0.7
ZNF397-202ENST00000330501 STAG3Q9UJ98 1225 aa10.65□□□□□ -0.7
ZNF397-202ENST00000330501 NCAPD3P42695 1498 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms