RNA–Protein interactions for RNA: ENST00000447781.2

LAPTM4BP1-201, Transcript of lysosomal protein transmembrane 4 beta pseudogene 1, humanhuman

BASIC

Gene LAPTM4BP1, Length 690 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BP1-201ENST00000447781 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
LAPTM4BP1-201ENST00000447781 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
LAPTM4BP1-201ENST00000447781 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
LAPTM4BP1-201ENST00000447781 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
LAPTM4BP1-201ENST00000447781 FOXD1Q16676 465 aa17.39■□□□□ 0.37
LAPTM4BP1-201ENST00000447781 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
LAPTM4BP1-201ENST00000447781 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
LAPTM4BP1-201ENST00000447781 MSH5O43196 834 aa16.35■□□□□ 0.21
LAPTM4BP1-201ENST00000447781 PIAS4Q8N2W9 510 aaPredicted RBP16.15■□□□□ 0.18
LAPTM4BP1-201ENST00000447781 PPP6R1Q9UPN7 881 aa15.99■□□□□ 0.15
LAPTM4BP1-201ENST00000447781 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
LAPTM4BP1-201ENST00000447781 ADRA2BP18089 450 aa15.9■□□□□ 0.14
LAPTM4BP1-201ENST00000447781 MAPK8IP2Q13387 824 aaPredicted RBP14.73□□□□□ -0.05
LAPTM4BP1-201ENST00000447781 ABCC9O60706 1549 aa14.71□□□□□ -0.06
LAPTM4BP1-201ENST00000447781 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
LAPTM4BP1-201ENST00000447781 CCDC180Q9P1Z9 1646 aa14.64□□□□□ -0.07
LAPTM4BP1-201ENST00000447781 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
LAPTM4BP1-201ENST00000447781 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
LAPTM4BP1-201ENST00000447781 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
LAPTM4BP1-201ENST00000447781 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
LAPTM4BP1-201ENST00000447781 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
LAPTM4BP1-201ENST00000447781 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
LAPTM4BP1-201ENST00000447781 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
LAPTM4BP1-201ENST00000447781 NACADO15069 1562 aa13.92□□□□□ -0.18
LAPTM4BP1-201ENST00000447781 DCAF8L2P0C7V8 631 aa13.85□□□□□ -0.19
LAPTM4BP1-201ENST00000447781 DNAJC5BQ9UF47 199 aa13.82□□□□□ -0.2
LAPTM4BP1-201ENST00000447781 CNKSR2Q8WXI2 1034 aa13.77□□□□□ -0.21
LAPTM4BP1-201ENST00000447781 MYO15BQ96JP2 1530 aa13.77□□□□□ -0.21
LAPTM4BP1-201ENST00000447781 RNF216Q9NWF9 866 aaPredicted RBP13.75□□□□□ -0.21
LAPTM4BP1-201ENST00000447781 PABPN1Q86U42 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
LAPTM4BP1-201ENST00000447781 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
LAPTM4BP1-201ENST00000447781 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
LAPTM4BP1-201ENST00000447781 DCAF1Q9Y4B6 1507 aa13.58□□□□□ -0.24
LAPTM4BP1-201ENST00000447781 BICRAQ9NZM4 1560 aa13.55□□□□□ -0.24
LAPTM4BP1-201ENST00000447781 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
LAPTM4BP1-201ENST00000447781 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
LAPTM4BP1-201ENST00000447781 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
LAPTM4BP1-201ENST00000447781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.28
LAPTM4BP1-201ENST00000447781 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
LAPTM4BP1-201ENST00000447781 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
LAPTM4BP1-201ENST00000447781 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
LAPTM4BP1-201ENST00000447781 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
LAPTM4BP1-201ENST00000447781 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
LAPTM4BP1-201ENST00000447781 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
LAPTM4BP1-201ENST00000447781 POTEHQ6S545 545 aa12.99□□□□□ -0.33
LAPTM4BP1-201ENST00000447781 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
LAPTM4BP1-201ENST00000447781 DSG3P32926 999 aa12.95□□□□□ -0.34
LAPTM4BP1-201ENST00000447781 CAPN15O75808 1086 aa12.92□□□□□ -0.34
LAPTM4BP1-201ENST00000447781 NCAPD3P42695 1498 aa12.89□□□□□ -0.35
LAPTM4BP1-201ENST00000447781 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
LAPTM4BP1-201ENST00000447781 SMARCA2P51531 1590 aa12.77□□□□□ -0.37
LAPTM4BP1-201ENST00000447781 HMGXB3Q12766 1538 aa12.75□□□□□ -0.37
LAPTM4BP1-201ENST00000447781 SMARCA4P51532 1647 aa12.74□□□□□ -0.37
LAPTM4BP1-201ENST00000447781 DNAJC5Q9H3Z4 198 aa12.74□□□□□ -0.37
LAPTM4BP1-201ENST00000447781 BAZ1AQ9NRL2 1556 aaPredicted RBP12.73□□□□□ -0.37
LAPTM4BP1-201ENST00000447781 CUX2O14529 1486 aa12.72□□□□□ -0.37
LAPTM4BP1-201ENST00000447781 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
LAPTM4BP1-201ENST00000447781 BAZ1BQ9UIG0 1483 aaKnown RBP12.68□□□□□ -0.38
LAPTM4BP1-201ENST00000447781 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
LAPTM4BP1-201ENST00000447781 PEG3Q9GZU2 1588 aa12.66□□□□□ -0.38
LAPTM4BP1-201ENST00000447781 ABCB7O75027 752 aa12.65□□□□□ -0.38
LAPTM4BP1-201ENST00000447781 TRHP20396 242 aaPredicted RBP12.63□□□□□ -0.39
LAPTM4BP1-201ENST00000447781 MROH2BQ7Z745 1585 aa12.61□□□□□ -0.39
LAPTM4BP1-201ENST00000447781 NESP48681 1621 aa12.61□□□□□ -0.39
LAPTM4BP1-201ENST00000447781 KCNA4P22459 653 aa12.59□□□□□ -0.39
LAPTM4BP1-201ENST00000447781 ZNF219Q9P2Y4 722 aaPredicted RBP12.55□□□□□ -0.4
LAPTM4BP1-201ENST00000447781 LAMC3Q9Y6N6 1575 aa12.54□□□□□ -0.4
LAPTM4BP1-201ENST00000447781 PDS5BQ9NTI5 1447 aa12.53□□□□□ -0.4
LAPTM4BP1-201ENST00000447781 CADPSQ9ULU8 1353 aa12.5□□□□□ -0.41
LAPTM4BP1-201ENST00000447781 APLP2Q06481 763 aa12.49□□□□□ -0.41
LAPTM4BP1-201ENST00000447781 THOC2Q8NI27 1593 aaKnown RBP12.45□□□□□ -0.42
LAPTM4BP1-201ENST00000447781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
LAPTM4BP1-201ENST00000447781 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
LAPTM4BP1-201ENST00000447781 WIZO95785 1651 aa12.39□□□□□ -0.43
LAPTM4BP1-201ENST00000447781 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
LAPTM4BP1-201ENST00000447781 MRC2Q9UBG0 1479 aa12.39□□□□□ -0.43
LAPTM4BP1-201ENST00000447781 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
LAPTM4BP1-201ENST00000447781 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
LAPTM4BP1-201ENST00000447781 CFTRP13569 1480 aa12.34□□□□□ -0.43
LAPTM4BP1-201ENST00000447781 WDR62O43379 1518 aa12.33□□□□□ -0.44
LAPTM4BP1-201ENST00000447781 FANCD2Q9BXW9 1451 aa12.33□□□□□ -0.44
LAPTM4BP1-201ENST00000447781 CEP164Q9UPV0 1460 aa12.33□□□□□ -0.44
LAPTM4BP1-201ENST00000447781 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
LAPTM4BP1-201ENST00000447781 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
LAPTM4BP1-201ENST00000447781 CHRDL2Q6WN34 429 aa12.24□□□□□ -0.45
LAPTM4BP1-201ENST00000447781 URB2Q14146 1524 aaKnown RBP12.2□□□□□ -0.46
LAPTM4BP1-201ENST00000447781 POLA2Q14181 598 aa12.18□□□□□ -0.46
LAPTM4BP1-201ENST00000447781 CCDC88BA6NC98 1476 aa12.18□□□□□ -0.46
LAPTM4BP1-201ENST00000447781 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
LAPTM4BP1-201ENST00000447781 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
LAPTM4BP1-201ENST00000447781 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
LAPTM4BP1-201ENST00000447781 IFT140Q96RY7 1462 aa12.11□□□□□ -0.47
LAPTM4BP1-201ENST00000447781 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
LAPTM4BP1-201ENST00000447781 TOPBP1Q92547 1522 aa12.07□□□□□ -0.48
LAPTM4BP1-201ENST00000447781 ZNF608Q9ULD9 1512 aaPredicted RBP12.05□□□□□ -0.48
LAPTM4BP1-201ENST00000447781 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
LAPTM4BP1-201ENST00000447781 PRDM2Q13029 1718 aa12.01□□□□□ -0.49
LAPTM4BP1-201ENST00000447781 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
LAPTM4BP1-201ENST00000447781 ATF5Q9Y2D1 282 aaPredicted RBP11.98□□□□□ -0.49
LAPTM4BP1-201ENST00000447781 AQRO60306 1485 aaKnown RBP eCLIP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms