RNA–Protein interactions for RNA: ENST00000555642.1

AL355922.4-201, humanhuman

TSL 3 BASIC

Gene AL355922.4, Length 449 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355922.4-201ENST00000555642 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
AL355922.4-201ENST00000555642 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
AL355922.4-201ENST00000555642 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
AL355922.4-201ENST00000555642 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
AL355922.4-201ENST00000555642 FOXD1Q16676 465 aa18.59■□□□□ 0.57
AL355922.4-201ENST00000555642 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
AL355922.4-201ENST00000555642 NISCHQ9Y2I1 1504 aa17.7■□□□□ 0.42
AL355922.4-201ENST00000555642 MSH5O43196 834 aa17.64■□□□□ 0.41
AL355922.4-201ENST00000555642 PIAS4Q8N2W9 510 aaPredicted RBP17.3■□□□□ 0.36
AL355922.4-201ENST00000555642 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
AL355922.4-201ENST00000555642 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
AL355922.4-201ENST00000555642 ADRA2BP18089 450 aa16.9■□□□□ 0.3
AL355922.4-201ENST00000555642 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
AL355922.4-201ENST00000555642 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
AL355922.4-201ENST00000555642 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
AL355922.4-201ENST00000555642 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
AL355922.4-201ENST00000555642 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
AL355922.4-201ENST00000555642 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
AL355922.4-201ENST00000555642 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
AL355922.4-201ENST00000555642 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
AL355922.4-201ENST00000555642 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
AL355922.4-201ENST00000555642 DCAF1Q9Y4B6 1507 aa14.78□□□□□ -0.04
AL355922.4-201ENST00000555642 PPP4R3CPQ6ZMV5 832 aa14.78□□□□□ -0.04
AL355922.4-201ENST00000555642 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
AL355922.4-201ENST00000555642 CNKSR2Q8WXI2 1034 aa14.63□□□□□ -0.07
AL355922.4-201ENST00000555642 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
AL355922.4-201ENST00000555642 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
AL355922.4-201ENST00000555642 NACADO15069 1562 aa14.49□□□□□ -0.09
AL355922.4-201ENST00000555642 DCAF8L2P0C7V8 631 aa14.46□□□□□ -0.09
AL355922.4-201ENST00000555642 DNAJC5BQ9UF47 199 aa14.43□□□□□ -0.1
AL355922.4-201ENST00000555642 ABCC9O60706 1549 aa14.41□□□□□ -0.1
AL355922.4-201ENST00000555642 RB1CC1Q8TDY2 1594 aa14.36□□□□□ -0.11
AL355922.4-201ENST00000555642 SHROOM4Q9ULL8 1493 aa14.26□□□□□ -0.13
AL355922.4-201ENST00000555642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.13
AL355922.4-201ENST00000555642 SCRIBQ14160 1630 aa14.16□□□□□ -0.14
AL355922.4-201ENST00000555642 POTEHQ6S545 545 aa14.12□□□□□ -0.15
AL355922.4-201ENST00000555642 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
AL355922.4-201ENST00000555642 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
AL355922.4-201ENST00000555642 CAPN15O75808 1086 aa13.87□□□□□ -0.19
AL355922.4-201ENST00000555642 DSG3P32926 999 aa13.84□□□□□ -0.19
AL355922.4-201ENST00000555642 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
AL355922.4-201ENST00000555642 SUPT5HO00267 1087 aaKnown RBP13.82□□□□□ -0.2
AL355922.4-201ENST00000555642 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
AL355922.4-201ENST00000555642 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
AL355922.4-201ENST00000555642 BAZ1AQ9NRL2 1556 aaPredicted RBP13.79□□□□□ -0.2
AL355922.4-201ENST00000555642 BICRAQ9NZM4 1560 aa13.69□□□□□ -0.22
AL355922.4-201ENST00000555642 RSF1Q96T23 1441 aaPredicted RBP13.66□□□□□ -0.22
AL355922.4-201ENST00000555642 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
AL355922.4-201ENST00000555642 MROH2BQ7Z745 1585 aa13.57□□□□□ -0.24
AL355922.4-201ENST00000555642 CECR2Q9BXF3 1484 aa13.56□□□□□ -0.24
AL355922.4-201ENST00000555642 WIZO95785 1651 aa13.52□□□□□ -0.25
AL355922.4-201ENST00000555642 PEG3Q9GZU2 1588 aa13.51□□□□□ -0.25
AL355922.4-201ENST00000555642 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
AL355922.4-201ENST00000555642 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
AL355922.4-201ENST00000555642 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
AL355922.4-201ENST00000555642 ABCB7O75027 752 aa13.49□□□□□ -0.25
AL355922.4-201ENST00000555642 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
AL355922.4-201ENST00000555642 APLP2Q06481 763 aa13.45□□□□□ -0.26
AL355922.4-201ENST00000555642 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
AL355922.4-201ENST00000555642 EIF4G1Q04637 1599 aaKnown RBP13.37□□□□□ -0.27
AL355922.4-201ENST00000555642 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
AL355922.4-201ENST00000555642 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
AL355922.4-201ENST00000555642 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
AL355922.4-201ENST00000555642 ATAD2BQ9ULI0 1458 aa13.31□□□□□ -0.28
AL355922.4-201ENST00000555642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
AL355922.4-201ENST00000555642 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
AL355922.4-201ENST00000555642 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
AL355922.4-201ENST00000555642 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
AL355922.4-201ENST00000555642 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
AL355922.4-201ENST00000555642 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
AL355922.4-201ENST00000555642 PRDM2Q13029 1718 aa13.17□□□□□ -0.3
AL355922.4-201ENST00000555642 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
AL355922.4-201ENST00000555642 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
AL355922.4-201ENST00000555642 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
AL355922.4-201ENST00000555642 KCNA4P22459 653 aa13.08□□□□□ -0.32
AL355922.4-201ENST00000555642 POLA2Q14181 598 aa13□□□□□ -0.33
AL355922.4-201ENST00000555642 EEA1Q15075 1411 aa12.99□□□□□ -0.33
AL355922.4-201ENST00000555642 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
AL355922.4-201ENST00000555642 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.33
AL355922.4-201ENST00000555642 CFTRP13569 1480 aa12.96□□□□□ -0.34
AL355922.4-201ENST00000555642 ABCC8Q09428 1581 aa12.94□□□□□ -0.34
AL355922.4-201ENST00000555642 BIVM-ERCC5R4GMW8 1640 aa12.92□□□□□ -0.34
AL355922.4-201ENST00000555642 LAMC3Q9Y6N6 1575 aa12.91□□□□□ -0.34
AL355922.4-201ENST00000555642 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
AL355922.4-201ENST00000555642 CADPSQ9ULU8 1353 aa12.89□□□□□ -0.35
AL355922.4-201ENST00000555642 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
AL355922.4-201ENST00000555642 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
AL355922.4-201ENST00000555642 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
AL355922.4-201ENST00000555642 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
AL355922.4-201ENST00000555642 FANCD2Q9BXW9 1451 aa12.76□□□□□ -0.37
AL355922.4-201ENST00000555642 CEP164Q9UPV0 1460 aa12.75□□□□□ -0.37
AL355922.4-201ENST00000555642 KIF21BO75037 1637 aa12.74□□□□□ -0.37
AL355922.4-201ENST00000555642 DNMBPQ6XZF7 1577 aa12.74□□□□□ -0.37
AL355922.4-201ENST00000555642 PIP4P2Q8N4L2 257 aa12.74□□□□□ -0.37
AL355922.4-201ENST00000555642 HAX1O00165 279 aa12.72□□□□□ -0.37
AL355922.4-201ENST00000555642 CUX1P39880 1505 aa12.72□□□□□ -0.37
AL355922.4-201ENST00000555642 GOLGA3Q08378 1498 aa12.72□□□□□ -0.37
AL355922.4-201ENST00000555642 REM2Q8IYK8 340 aaPredicted RBP12.7□□□□□ -0.38
AL355922.4-201ENST00000555642 FAM9AQ8IZU1 332 aaPredicted RBP12.7□□□□□ -0.38
AL355922.4-201ENST00000555642 KIF27Q86VH2 1401 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms