RNA–Protein interactions for RNA: ENST00000422700.1

LINC01013-201, Transcript of long intergenic non-protein coding RNA 1013, humanhuman

TSL 5 BASIC

Gene LINC01013, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01013-201ENST00000422700 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
LINC01013-201ENST00000422700 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
LINC01013-201ENST00000422700 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
LINC01013-201ENST00000422700 PHF23Q9BUL5 403 aaPredicted RBP19.21■□□□□ 0.67
LINC01013-201ENST00000422700 FOXD1Q16676 465 aa18.23■□□□□ 0.51
LINC01013-201ENST00000422700 POTEDQ86YR6 584 aa17.64■□□□□ 0.41
LINC01013-201ENST00000422700 MSH5O43196 834 aa17.33■□□□□ 0.37
LINC01013-201ENST00000422700 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
LINC01013-201ENST00000422700 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
LINC01013-201ENST00000422700 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
LINC01013-201ENST00000422700 ADRA2BP18089 450 aa16.55■□□□□ 0.24
LINC01013-201ENST00000422700 NISCHQ9Y2I1 1504 aa16.28■□□□□ 0.2
LINC01013-201ENST00000422700 DMRT2Q9Y5R5 561 aa15.44■□□□□ 0.06
LINC01013-201ENST00000422700 MAPK8IP2Q13387 824 aaPredicted RBP15.33■□□□□ 0.04
LINC01013-201ENST00000422700 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
LINC01013-201ENST00000422700 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
LINC01013-201ENST00000422700 HOXD11P31277 338 aaPredicted RBP14.72□□□□□ -0.05
LINC01013-201ENST00000422700 RNF39Q9H2S5 420 aa14.71□□□□□ -0.05
LINC01013-201ENST00000422700 DCAF8L1A6NGE4 600 aa14.69□□□□□ -0.06
LINC01013-201ENST00000422700 PPP4R3CPQ6ZMV5 832 aa14.58□□□□□ -0.08
LINC01013-201ENST00000422700 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
LINC01013-201ENST00000422700 RNF216Q9NWF9 866 aaPredicted RBP14.48□□□□□ -0.09
LINC01013-201ENST00000422700 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
LINC01013-201ENST00000422700 DNAJC5BQ9UF47 199 aa14.43□□□□□ -0.1
LINC01013-201ENST00000422700 CCDC180Q9P1Z9 1646 aa14.18□□□□□ -0.14
LINC01013-201ENST00000422700 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
LINC01013-201ENST00000422700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC01013-201ENST00000422700 POTEHQ6S545 545 aa13.74□□□□□ -0.21
LINC01013-201ENST00000422700 ZCCHC6Q5VYS8 1495 aaKnown RBP13.67□□□□□ -0.22
LINC01013-201ENST00000422700 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
LINC01013-201ENST00000422700 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
LINC01013-201ENST00000422700 DSG3P32926 999 aa13.6□□□□□ -0.23
LINC01013-201ENST00000422700 CAPN15O75808 1086 aa13.5□□□□□ -0.25
LINC01013-201ENST00000422700 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
LINC01013-201ENST00000422700 DCAF8L2P0C7V8 631 aa13.47□□□□□ -0.25
LINC01013-201ENST00000422700 ABCC9O60706 1549 aa13.46□□□□□ -0.26
LINC01013-201ENST00000422700 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
LINC01013-201ENST00000422700 SHROOM4Q9ULL8 1493 aa13.32□□□□□ -0.28
LINC01013-201ENST00000422700 APLP2Q06481 763 aa13.29□□□□□ -0.28
LINC01013-201ENST00000422700 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
LINC01013-201ENST00000422700 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
LINC01013-201ENST00000422700 NACADO15069 1562 aa13.21□□□□□ -0.3
LINC01013-201ENST00000422700 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
LINC01013-201ENST00000422700 TRHP20396 242 aaPredicted RBP13.16□□□□□ -0.3
LINC01013-201ENST00000422700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
LINC01013-201ENST00000422700 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
LINC01013-201ENST00000422700 ABCB7O75027 752 aa13.11□□□□□ -0.31
LINC01013-201ENST00000422700 RB1CC1Q8TDY2 1594 aa13.09□□□□□ -0.31
LINC01013-201ENST00000422700 SCRIBQ14160 1630 aa13.08□□□□□ -0.31
LINC01013-201ENST00000422700 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
LINC01013-201ENST00000422700 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.32
LINC01013-201ENST00000422700 KCNA4P22459 653 aa12.95□□□□□ -0.34
LINC01013-201ENST00000422700 UNC13AQ9UPW8 1703 aa12.89□□□□□ -0.35
LINC01013-201ENST00000422700 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
LINC01013-201ENST00000422700 SUPT5HO00267 1087 aaKnown RBP12.8□□□□□ -0.36
LINC01013-201ENST00000422700 BICRAQ9NZM4 1560 aa12.74□□□□□ -0.37
LINC01013-201ENST00000422700 POLA2Q14181 598 aa12.74□□□□□ -0.37
LINC01013-201ENST00000422700 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
LINC01013-201ENST00000422700 PABPN1Q86U42 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC01013-201ENST00000422700 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
LINC01013-201ENST00000422700 SP7Q8TDD2 431 aaPredicted RBP12.67□□□□□ -0.38
LINC01013-201ENST00000422700 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
LINC01013-201ENST00000422700 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
LINC01013-201ENST00000422700 MROH2BQ7Z745 1585 aa12.6□□□□□ -0.39
LINC01013-201ENST00000422700 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
LINC01013-201ENST00000422700 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
LINC01013-201ENST00000422700 SMARCA4P51532 1647 aa12.53□□□□□ -0.4
LINC01013-201ENST00000422700 WIZO95785 1651 aa12.51□□□□□ -0.41
LINC01013-201ENST00000422700 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
LINC01013-201ENST00000422700 PIP4P2Q8N4L2 257 aa12.46□□□□□ -0.41
LINC01013-201ENST00000422700 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC01013-201ENST00000422700 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
LINC01013-201ENST00000422700 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
LINC01013-201ENST00000422700 TOP2AP11388 1531 aaKnown RBP12.34□□□□□ -0.43
LINC01013-201ENST00000422700 EIF4G1Q04637 1599 aaKnown RBP12.34□□□□□ -0.43
LINC01013-201ENST00000422700 HAX1O00165 279 aa12.34□□□□□ -0.43
LINC01013-201ENST00000422700 ATAD2BQ9ULI0 1458 aa12.32□□□□□ -0.44
LINC01013-201ENST00000422700 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
LINC01013-201ENST00000422700 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
LINC01013-201ENST00000422700 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
LINC01013-201ENST00000422700 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
LINC01013-201ENST00000422700 CCDC88BA6NC98 1476 aa12.24□□□□□ -0.45
LINC01013-201ENST00000422700 BAZ1BQ9UIG0 1483 aaKnown RBP12.24□□□□□ -0.45
LINC01013-201ENST00000422700 NCAPD3P42695 1498 aa12.19□□□□□ -0.46
LINC01013-201ENST00000422700 HMGXB3Q12766 1538 aa12.17□□□□□ -0.46
LINC01013-201ENST00000422700 CC2D2AQ9P2K1 1620 aa12.17□□□□□ -0.46
LINC01013-201ENST00000422700 SLC4A1APQ9BWU0 796 aaKnown RBP12.16□□□□□ -0.46
LINC01013-201ENST00000422700 EVX2Q03828 476 aa12.12□□□□□ -0.47
LINC01013-201ENST00000422700 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
LINC01013-201ENST00000422700 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
LINC01013-201ENST00000422700 SPDYE2Q495Y8 402 aa12.1□□□□□ -0.47
LINC01013-201ENST00000422700 ATXN8OSP0DMR3 200 aa12.06□□□□□ -0.48
LINC01013-201ENST00000422700 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
LINC01013-201ENST00000422700 ABCC8Q09428 1581 aa12□□□□□ -0.49
LINC01013-201ENST00000422700 SPDYE1Q8NFV5 336 aaPredicted RBP11.99□□□□□ -0.49
LINC01013-201ENST00000422700 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
LINC01013-201ENST00000422700 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
LINC01013-201ENST00000422700 FBLN2P98095 1184 aa11.98□□□□□ -0.49
LINC01013-201ENST00000422700 CFTRP13569 1480 aa11.93□□□□□ -0.5
LINC01013-201ENST00000422700 CADPSQ9ULU8 1353 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms