RNA–Protein interactions for RNA: ENST00000508358.1

AC004063.1-201, humanhuman

TSL 4 BASIC

Gene AC004063.1, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004063.1-201ENST00000508358 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
AC004063.1-201ENST00000508358 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
AC004063.1-201ENST00000508358 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
AC004063.1-201ENST00000508358 PHF23Q9BUL5 403 aaPredicted RBP22.25■■□□□ 1.15
AC004063.1-201ENST00000508358 FOXD1Q16676 465 aa20.99■□□□□ 0.95
AC004063.1-201ENST00000508358 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
AC004063.1-201ENST00000508358 MSH5O43196 834 aa19.8■□□□□ 0.76
AC004063.1-201ENST00000508358 PIAS4Q8N2W9 510 aaPredicted RBP19.63■□□□□ 0.73
AC004063.1-201ENST00000508358 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
AC004063.1-201ENST00000508358 ADRA2BP18089 450 aa19.45■□□□□ 0.7
AC004063.1-201ENST00000508358 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
AC004063.1-201ENST00000508358 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
AC004063.1-201ENST00000508358 MAPK8IP2Q13387 824 aaPredicted RBP17.88■□□□□ 0.45
AC004063.1-201ENST00000508358 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
AC004063.1-201ENST00000508358 PPP4R3CPQ6ZMV5 832 aa17.54■□□□□ 0.4
AC004063.1-201ENST00000508358 KCNA4P22459 653 aa17.38■□□□□ 0.37
AC004063.1-201ENST00000508358 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
AC004063.1-201ENST00000508358 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
AC004063.1-201ENST00000508358 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
AC004063.1-201ENST00000508358 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
AC004063.1-201ENST00000508358 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
AC004063.1-201ENST00000508358 RNF216Q9NWF9 866 aaPredicted RBP17.04■□□□□ 0.32
AC004063.1-201ENST00000508358 NPM3O75607 178 aaKnown RBP16.89■□□□□ 0.29
AC004063.1-201ENST00000508358 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
AC004063.1-201ENST00000508358 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
AC004063.1-201ENST00000508358 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
AC004063.1-201ENST00000508358 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
AC004063.1-201ENST00000508358 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
AC004063.1-201ENST00000508358 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
AC004063.1-201ENST00000508358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.22
AC004063.1-201ENST00000508358 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
AC004063.1-201ENST00000508358 ZBTB22O15209 634 aa15.98■□□□□ 0.15
AC004063.1-201ENST00000508358 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
AC004063.1-201ENST00000508358 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
AC004063.1-201ENST00000508358 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
AC004063.1-201ENST00000508358 CAPN15O75808 1086 aa15.81■□□□□ 0.12
AC004063.1-201ENST00000508358 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
AC004063.1-201ENST00000508358 DSG3P32926 999 aa15.7■□□□□ 0.1
AC004063.1-201ENST00000508358 APLP2Q06481 763 aa15.69■□□□□ 0.1
AC004063.1-201ENST00000508358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
AC004063.1-201ENST00000508358 HNRNPUL2Q1KMD3 747 aaKnown RBP15.64■□□□□ 0.09
AC004063.1-201ENST00000508358 MYCNP04198 464 aaPredicted RBP15.6■□□□□ 0.09
AC004063.1-201ENST00000508358 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
AC004063.1-201ENST00000508358 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
AC004063.1-201ENST00000508358 SAMD1Q6SPF0 538 aaPredicted RBP15.5■□□□□ 0.07
AC004063.1-201ENST00000508358 ABCC9O60706 1549 aa15.48■□□□□ 0.07
AC004063.1-201ENST00000508358 ABCB7O75027 752 aa15.36■□□□□ 0.05
AC004063.1-201ENST00000508358 ATXN8OSP0DMR3 200 aa15.35■□□□□ 0.05
AC004063.1-201ENST00000508358 POTEHQ6S545 545 aa15.23■□□□□ 0.03
AC004063.1-201ENST00000508358 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
AC004063.1-201ENST00000508358 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
AC004063.1-201ENST00000508358 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
AC004063.1-201ENST00000508358 POLA2Q14181 598 aa15.07■□□□□ 0
AC004063.1-201ENST00000508358 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
AC004063.1-201ENST00000508358 CHRDL2Q6WN34 429 aa14.73□□□□□ -0.05
AC004063.1-201ENST00000508358 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
AC004063.1-201ENST00000508358 RB1CC1Q8TDY2 1594 aa14.57□□□□□ -0.08
AC004063.1-201ENST00000508358 FBLN2P98095 1184 aa14.55□□□□□ -0.08
AC004063.1-201ENST00000508358 FKBP8Q14318 412 aa14.55□□□□□ -0.08
AC004063.1-201ENST00000508358 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
AC004063.1-201ENST00000508358 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
AC004063.1-201ENST00000508358 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
AC004063.1-201ENST00000508358 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
AC004063.1-201ENST00000508358 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
AC004063.1-201ENST00000508358 NACADO15069 1562 aa14.37□□□□□ -0.11
AC004063.1-201ENST00000508358 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
AC004063.1-201ENST00000508358 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
AC004063.1-201ENST00000508358 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
AC004063.1-201ENST00000508358 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
AC004063.1-201ENST00000508358 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
AC004063.1-201ENST00000508358 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
AC004063.1-201ENST00000508358 FXR2P51116 673 aaKnown RBP eCLIP14.24□□□□□ -0.13
AC004063.1-201ENST00000508358 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
AC004063.1-201ENST00000508358 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.13
AC004063.1-201ENST00000508358 HAX1O00165 279 aa14.16□□□□□ -0.14
AC004063.1-201ENST00000508358 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
AC004063.1-201ENST00000508358 SPDYE1Q8NFV5 336 aaPredicted RBP14.13□□□□□ -0.15
AC004063.1-201ENST00000508358 BICRAQ9NZM4 1560 aa14.08□□□□□ -0.16
AC004063.1-201ENST00000508358 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
AC004063.1-201ENST00000508358 SSUH2Q9Y2M2 353 aa14.07□□□□□ -0.16
AC004063.1-201ENST00000508358 PROM2Q8N271 834 aa14.06□□□□□ -0.16
AC004063.1-201ENST00000508358 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
AC004063.1-201ENST00000508358 PRKAR2AP13861 404 aaKnown RBP13.98□□□□□ -0.17
AC004063.1-201ENST00000508358 FBXO3Q9UK99 471 aa13.97□□□□□ -0.17
AC004063.1-201ENST00000508358 CECR2Q9BXF3 1484 aa13.95□□□□□ -0.18
AC004063.1-201ENST00000508358 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
AC004063.1-201ENST00000508358 PRR29P0C7W0 189 aa13.86□□□□□ -0.19
AC004063.1-201ENST00000508358 EVX2Q03828 476 aa13.85□□□□□ -0.19
AC004063.1-201ENST00000508358 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
AC004063.1-201ENST00000508358 EIF4G1Q04637 1599 aaKnown RBP13.8□□□□□ -0.2
AC004063.1-201ENST00000508358 SCRIBQ14160 1630 aa13.8□□□□□ -0.2
AC004063.1-201ENST00000508358 C19orf67A6NJJ6 358 aa13.79□□□□□ -0.2
AC004063.1-201ENST00000508358 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
AC004063.1-201ENST00000508358 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
AC004063.1-201ENST00000508358 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
AC004063.1-201ENST00000508358 CHADLQ6NUI6 762 aa13.74□□□□□ -0.21
AC004063.1-201ENST00000508358 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
AC004063.1-201ENST00000508358 DCAF1Q9Y4B6 1507 aa13.73□□□□□ -0.21
AC004063.1-201ENST00000508358 GABBR2O75899 941 aa13.61□□□□□ -0.23
AC004063.1-201ENST00000508358 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms